Cynara cardunculus var. scolymus (artichoke): 112527920
Help
Entry
112527920 CDS
T05604
Name
(RefSeq) probable galacturonosyltransferase 10
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112527920
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112527920
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112527920
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112527920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
112527920
NCBI-ProteinID:
XP_024994545
LinkDB
All DBs
Position
LG 15:complement(11479285..11486050)
Genome browser
AA seq
534 aa
AA seq
DB search
MRRPRPEFRRSARRRFSNVFWLTLCGLVALMLIVLLSRESTQPRSRSVLAKNSYRHDKVI
EGLNVTAEMLNPDSIARQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAA
LRRSPLTLRESETAVRDMALLLFQAQQLHYDSATMIMRLKARIQDLEEQMSSVTDKSNKY
GQIAAEEVPKSLYCLGVRLTTEWFKHLDLQKKVSRNVQIGMKLKDNNLHHFCVFSDNILA
TSVVINSTALNSLKPDRVVFHLVTDEVNYAAMKAWFTMNNFRGVTVDVQKFEDFSWLNAS
YVPVLKQLQDSDTQNYYFSGNNDGGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKLVFL
DDDVVVQKDLSGLFTVDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRSHFDPDACGWAF
GMNVFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPHWHVLGL
GYTNVDPQVIENGAVLHFNGNSKPWLKIGIEKYKALWEKYVDYSHPMLERCNFH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaccaaggccggagtttcggcggtcagcgaggcggcgattttcgaatgtcttt
tggttaacattatgtggattggtggctttgatgttgatcgttttattaagtcgagagagc
acccaacctagatccagatccgtgttagctaagaattcttacaggcatgataaagtcata
gagggccttaatgtcacagctgaaatgttgaatcctgactcaatcgcaaggcaactcaat
gatcaaatatcacttgcgaaggcatttgttgtgattgcaaaagaaagcaacaatctccaa
tttgcatgggaactaagtgctcagattcgtaactcccagatccttctttcaaatgctgcc
ttaaggcgatcaccactgacacttcgagaatcagagactgctgttagagatatggctctt
ttactcttccaagctcaacagctccattacgacagtgcaaccatgatcatgagactcaaa
gccagaatccaggatcttgaagaacagatgagttctgtaacagataaaagtaacaaatac
ggacaaatagctgctgaagaagtccccaaaagcctatactgtcttggtgtccgtttgaca
actgaatggttcaaacatctggatttacaaaaaaaggtctccagaaacgttcaaatcggc
atgaaactgaaagacaacaacctgcatcatttctgtgtcttctctgacaacattcttgca
acttcagttgtgataaactcgacggccttaaattccctaaagcctgatagggtagttttc
cacctggtaactgatgaagttaactatgctgcgatgaaggcatggtttaccatgaacaat
ttccgaggggtgactgttgatgtccagaagtttgaagattttagctggttaaatgcttct
tatgtacctgttcttaaacagctacaagactcagacacccagaactattacttttctgga
aacaacgatggtggtaaaactccaatcaagttcagaaaccccaagtatctttctatgttg
aaccatttaaggttttacattccggaagtttttcctgcattgaagaaactggtgtttctt
gacgatgatgtcgtggttcaaaaggatctctcgggtcttttcactgttgatctgaatggc
aatgtcaatggagctgtggaaacatgtatggaaacatttcacagataccacaagtacttg
aactactctcacccactcataagatcccatttcgaccctgatgcttgtggctgggctttc
gggatgaatgtttttgatttggtcgagtggagaaaaaggaacgttaccggcatttaccat
tattggcaagaaaagaatgtagacagaacgttgtggaagctgggaacgctgccacctgga
cttcttacgttttatggattgacagagcctttagatccccactggcatgtactaggtttg
ggatatacgaacgtcgatcctcaggtgattgaaaatggagccgtgctacactttaacggc
aactcgaagccttggttgaaaattggaatagaaaagtacaaggctttatgggagaagtat
gttgactacagtcatccaatgctggaaagatgcaattttcactaa
DBGET
integrated database retrieval system
