Cynara cardunculus var. scolymus (artichoke): 112528091
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Entry
112528091 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112528091
04121 Ubiquitin system [BR:
ccav04121
]
112528091
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112528091
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112528091
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112528091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Zf_IFT144_1st
zf-RING_5
zf-C3HC4_3
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
112528091
NCBI-ProteinID:
XP_024994783
LinkDB
All DBs
Position
LG_1
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AA seq
384 aa
AA seq
DB search
MEEETASTRYWCHECARVVDPIMEAESIKCSLCNGGFVEEVDSIRSDHHQQQDGGSDSDR
ALSLWAPILLGMMTTPRRHRRFRQLGFDEDNDEEDRRDSDDRRDSDDRRHQEGDMELDPE
LESMRRRRNSTAILHLLQGIRAGMVSESENNVEGGRGDNNREHDRDHERERVILINPFNQ
TIIVHGGGGGNPFDSSNPSQNHPLGSFGDYFVGPGLEQLLQHLAENDPNRYGTPPAQKEA
VEAMPTVTIEENSIQCSVCLEEFEMGGEAREMPCKHRFHGDCILPWLELHSSCPVCRYQL
PADESKINREQETANGGVGNLLESGNGRNNEERRFSVSLPWPFSSLFSSGSNTVNLNSSS
VAGPSSSGDSESSPRGNEAERSDD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagacagcgtcaacaagatattggtgccatgaatgtgctagggtcgttgat
ccgatcatggaggccgaatccatcaaatgttcgttatgtaacggcggattcgtggaggaa
gtcgacagcataaggagtgatcaccaccagcaacaggatggtggttccgactccgatcgt
gcactttcgttatgggctccaatcttgcttggtatgatgaccacacctcgccgtcaccgg
agatttagacagcttggatttgatgaggacaatgacgaagaagaccgccgtgattcggac
gaccgccgtgattcggacgaccgccgccaccaggaaggagacatggagttggaccctgaa
cttgagtccatgaggaggcggcggaattccaccgcaatcctccaccttctgcagggtatt
cgagccggaatggtatcggaatctgagaacaacgtggagggcggcagaggggacaacaac
cgggaacacgaccgtgatcatgaacgtgaacgcgttattctgatcaatccttttaatcaa
accatcatcgttcacggtggtggcggcggcaatccgttcgattcgagcaatccgtctcaa
aaccacccgttgggttctttcggtgattatttcgtcggacctggtttggagcaactcctg
cagcatttagccgagaacgatcccaaccgatacggaaccccaccggcacaaaaggaagcg
gtggaggcaatgccgactgtgacaatcgaagaaaactcgattcagtgttcggtttgtttg
gaagaattcgagatgggaggcgaagctcgcgaaatgccgtgtaaacacaggtttcatggc
gactgtatcttgccatggctggagcttcattcttcatgtccggtctgcaggtatcagttg
ccggctgacgaatcaaagatcaaccgagaacaagaaacggcgaacgggggtgtgggaaat
ttactggaatcgggaaacggaaggaataacgaagagagacgattttcagtatcgcttcct
tggccttttagcagcttgttctcatcgggatctaatacggtgaatctaaattcgagctcg
gtggcaggtccatcgtcgtcgggagattcggagtcatcaccgcgaggcaatgaagccgag
cgtagcgatgattga
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