Cynara cardunculus var. scolymus (artichoke): 112528142
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Entry
112528142 CDS
T05604
Name
(RefSeq) heat shock factor protein HSF8-like isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112528142
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
112528142
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
TMF_TATA_bd
APG6_N
AFAP_C
CENPU
CENP-F_leu_zip
Fv1_N
Seadorna_VP6
Fn1_3
Motif
Other DBs
NCBI-GeneID:
112528142
NCBI-ProteinID:
XP_024994851
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Position
LG_15
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AA seq
504 aa
AA seq
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MEARSYSNAAASAPDAGSSAPPPAPPPMSTVNAPPPFLVKTYDMVDDPSTDKVVSWSATN
NSFVVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLL
KSIVRRKSASGHNQQPPQPHAQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQ
QQQTTDNQMQSMVQRLQGMEQRQQQMMSFLAKAVNSPGFLAHFVQQQNESTRLITEGNKK
RRYKEDGVVSNDHPSVASSDGRIVKYHPMMNDAAQAMLKQIMKLDNASPRLGTFSNSPDS
YLVGDVSSEARSGSGVTLQEVNPPASGQSYLPAVTGVLSAPLEANSEVVATNQFPEASSL
VDGQEFPDVSELSCLQDMAPNASVNISNDYMQSEAQNRALLDPNLVDEKLSLEIGSFSPD
ADMEWDSNLLIEMEKYLTAYDPSLDQFLEQSPEVDTTDEMDSSPVDDHVMKGNESKPSET
ECSRSQVQQLTTQMGLLASNSRKA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcgtagttatagtaatgctgccgcatccgcacctgacgctggttcttctgct
ccaccgcctgcgccgcctccgatgtcgaccgtcaatgctccgccgcccttcttagttaag
acttacgacatggtggatgatccttctaccgataaggttgtttcgtggagtgccacgaat
aacagcttcgtcgtctgggacccgcccgagttcgctagagacctgttgcccaaatacttc
aagcacaataatttctccagcttcgttcgccagctcaatacttatggatttaggaaagtc
gatcctgatcgctgggaatttgcaaatgagggatttctacgaggtcagaaacacttgctt
aaaagtattgttcgccggaaatcagcttcgggacacaatcaacagcctccacaacctcat
gcacagagctcctctgtgggtgcatgtgttgaagttggaaaatttggtctggaggaagag
gttgagagactaaaaagggacaaaaatgttctgatgcaggaacttgtcaggctgaggcag
caacagcagaccactgataatcaaatgcaatcaatggtgcagcgccttcaggggatggaa
caaaggcagcagcagatgatgtcattcttggcgaaggcagtgaacagcccgggatttttg
gctcactttgtacaacagcaaaacgagagcaccaggctcattacggaggggaacaaaaaa
cgcaggtataaggaagatggagttgtttcaaacgaccacccatctgttgcttcctctgat
ggacgaattgttaagtaccatccgatgatgaatgatgcagcacaagcaatgctcaagcag
ataatgaaactagataacgcctcacctcgcttaggaactttcagcaacagtccggatagt
tatctagttggtgacgtttcttcggaagcccgtagtggctcaggagttactcttcaggag
gtcaacccaccagcttctggtcaatcttatttaccggctgttacaggagtactctctgca
cctctagaagcaaattccgaagtggtggcaacaaatcaattcccagaagcgagctcacta
gttgatggccaagaatttcctgatgtatctgagctctcatgcttgcaagatatggcgcca
aatgctagtgtcaacatctccaacgattacatgcagtctgaagcacagaatcgagcactc
ttggatccaaacttggttgatgagaaactttccttagaaattgggagtttctctcctgat
gcagacatggaatgggatagtaatttgctgatagagatggagaaataccttactgcatat
gacccgtcattggatcagtttcttgagcaaagcccagaggttgatacaaccgatgaaatg
gactccagtccggtggacgatcatgtcatgaagggaaatgaaagcaaaccatcagaaacc
gaatgttccaggtctcaagtgcagcaactcaccacacaaatggggcttcttgcttcaaat
tccagaaaagcttga
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