Cynara cardunculus var. scolymus (artichoke): 112528199
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Entry
112528199 CDS
T05604
Name
(RefSeq) (E)-beta-farnesene synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112528199
Enzymes [BR:
ccav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
112528199
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
112528199
NCBI-ProteinID:
XP_024994934
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Position
LG 15:15237776..15247209
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AA seq
572 aa
AA seq
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MSSFEMSTSSVSISLSSLVIDENNSTKQDHVIRNTVTFHPSIWGDQFLVYDEKDDLVAEK
QLVEELTEEIRKKLFITASSIHEPLQQIQLIDAIQRLGVAYHFEKEIEEALQHVYRTYGH
QGIHNNNNLQSVSLWFRILRQQGFNVSPEIFKNHMDEKGNLLSNDVESMLALYEASYMRV
EGEKVLDDALKFTKTHLAIIAQHPSCDSSLRTQIQEALRQPLRKRLPRLEAVRYIPIYQQ
QSSHNQLLLKLAKLDFNMLQSMHKKELSQICKWWKDLDMQNKLPFVRDRLIEGYFCILGI
YFEPHHSRLRMFLIKSCMWLIVMDDTFDNYGTYEELKIFTEVVERWSISCLDLLPEYMKV
IYLELVNIHQEMEESLEKEGKTYHIYYVKEMAKEYTRSLLAEAKWLKDGYMPTLDEYISN
SLITTTYAVVIEGSYVGGPDMLVTEDSFKWVATHPPLVKASCLILRLMNDIATHKEEQER
SHVASSIECYIKETGATEEEACEYFSKQVEDAWKVINRDSLKPTDVPFPLVKPVINLARI
SDVVYKGSINGYNHAGKELIQNIKSLLVHPLI
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttttgagatgtcaacttcctcggtttctatttctttgtcatcgttggtaatt
gatgaaaataatagcaccaagcaagatcacgtgatccgtaatacggtcacttttcatcct
agcatttggggggatcagtttcttgtatatgatgagaaagatgatttagttgcggagaaa
caacttgttgaagagctcacagaagaaataagaaaaaagctattcatcacagcttctagt
attcatgaacccctgcaacaaatacagctcattgatgcaatccaacgccttggtgtagcc
tatcattttgaaaaggagattgaggaagccttgcaacatgtctatcgtacatatggccat
caggggatccacaataataacaacctacaaagtgtttctctttggttccgaatcctcaga
caacaaggattcaatgtttcaccggaaatattcaagaaccatatggatgagaaggggaac
ttgttaagtaatgatgttgaaagcatgcttgctttgtacgaagcatcgtatatgagggtg
gaaggtgaaaaagtactggatgacgctctcaaattcactaaaactcaccttgccatcatt
gcccagcatccttcttgcgactcttctttaagaacccaaatacaagaagcactaaggcag
ccacttcggaaaaggttgccaaggctagaggcggtgcgttacatacctatctatcaacaa
caatcttcccataatcagctcttactgaagcttgcaaagttagattttaacatgcttcag
tcaatgcataaaaaggagcttagccaaatatgcaaatggtggaaagatttggacatgcaa
aataagctgccatttgtccgagacagattgatagaaggttacttttgcatattgggaatc
tatttcgagcctcatcattctcgtttaagaatgttcctaatcaaatcgtgcatgtggtta
atcgttatggatgatacatttgataattatggtacttatgaagagcttaaaatctttaca
gaagttgttgaaagatggtccataagctgcttggatttgctcccggaatacatgaaagta
atatatctagaacttgtgaatattcaccaagaaatggaggaatcacttgaaaaagaggga
aaaacatatcacatctactatgttaaggagatggcaaaagaatacactcgaagcctgtta
gcagaagctaaatggttaaaagatgggtacatgccgacactagatgaatacatctctaat
tcattgataactactacctatgcggtggtgatcgagggatcatatgttggcgggcccgac
atgctggtcacggaagattcctttaaatgggtggctacacatcctcctcttgtcaaggct
tcatgtttgattttaaggcttatgaatgatattgctacccacaaggaggaacaagaaaga
agtcatgttgcttcaagcatcgaatgctacataaaggaaactggtgcaactgaggaggaa
gcatgcgaatatttctcgaaacaagttgaagatgcatggaaagttataaatcgagattct
cttaagcctacggatgtcccatttccactagttaagcctgtaatcaaccttgcacgtatt
tctgatgtagtttataaaggcagcattaatggctacaatcatgccgggaaagaactgata
caaaacatcaaatccctgctcgttcaccctttaatttag
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