Cynara cardunculus var. scolymus (artichoke): 112528257
Help
Entry
112528257 CDS
T05604
Name
(RefSeq) HEAT repeat-containing protein 6 isoform X1
KO
K24815
HEAT repeat-containing protein 6
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccav04990
]
112528257
Domain-containing proteins not elsewhere classified [BR:
ccav04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
112528257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4042
HEAT
HEAT_EZ
HEAT_2
IFRD
Motif
Other DBs
NCBI-GeneID:
112528257
NCBI-ProteinID:
XP_024995014
LinkDB
All DBs
Position
LG 15:18851146..18874249
Genome browser
AA seq
1194 aa
AA seq
DB search
MEASTSNSSSAIRSWRTTFLTLRDEVQTSPTATTVIDLLNRFIFAQSETLIAAAPNLPVH
EVTSDAMFLVELARTISNSRGDDDALNALVQLSNLFQNFNHLISFKMTSSTWGLVLRTFG
GMVEMFLGSAGIRQDPSGNIAVTEATKQCLEIVRSLVDVNQRTIILSDNVQLLDFLLKTV
SFSQNVLAPCFSSGIQGCAPESRKMILRRNSLWEIQTTAFTMISEILSRVGTSLPADHWQ
STVDAFRNIIDVLASKGLLVESNVMDRFYTSLLHCLHLVLVNAKGSLQDHVAGFVAALRM
FIGYGLTSKSQNVLPAGVYKKDAKISTLNSHSSESSSAPYRPPHVRKKNQKGTQSKDSNS
LSILDCPPATIDYMSSDSDLSDSDGSAKGISNYRSSKVRVAAIVCIQDLCRSDPKLFTAQ
WTILLPSSDVLQARRYEANLMTCLLFDPYLKARIAAAFTLATMLEGPASVFLQVAEYKES
TKLGSFTALSSSLGQILMQLHTGILHLIKNEKNNGFLTSLFKILALLISCTPYSRMPDEL
LPTVILNLHGRMVEGFLTYNDQTGLLAVALSCLMDALSVSPSSLKVNEMLVAELSTGSNN
NKACSGLLSTLFHYSRPFTSPAVSLEALQVLKAVAHNYPDIMVLCWKQVSSIICEFLDPL
LPEGSSRAGTVNSGQTVGTIGEKVITSAIKLLDECLRAICGFKGTEDLSDDKLLSSPFTY
DYVKVKMISSAPSYGLENQLVASDDHPACATGSQQWCEAIEKHLSSTLFHSSAMMRAASV
TCFAGITSSVFVSLPEDKQHQIITYSINAAFDDEVPSVRSAACRAIGVIACFPQVFKSVE
ILCKFINAAEVNSHHSLVSVRIAASWALANLCDSLRHFVDRFTSTGSSGDLMDCSRMVSL
LIDCSLRLTRDGDKIKANAVRALGNLSRFVPCSSHGHGMQEYNTSFHIDTEHAGKSPNHV
SAETERCLVSTSFLQRTWEDSRWLERMVQAFLSCVTTGNVKVRWNVCHALSNLFLNETLK
LQDTDWAPSVFSILLLLLRDSSNFKIRIQAAAALAAPATTLDYGESYSDVVQGVEHTLEN
LGTDQMFAPSSFKYRVALEKQLTSTMLHLLGLASVTHRHHSVHDFLIKKASFLEEWLRSL
CLSLVNQFEAEHDSTWYQKKEVINRAIQSLVKVYESQNHQAMAQRFEKLVNKLV
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctcgacgtccaattcgtcttctgcaattcggtcatggaggacgacctttttg
accttgagggacgaagtgcagacctctccaactgccaccaccgtcattgatctccttaat
cgttttattttcgctcaatctgaaaccctgattgctgctgcccccaatctccctgtccat
gaggtcacctctgacgcgatgtttcttgtggaattggctcggaccatatcgaattccaga
ggggacgatgatgcacttaatgcattggtgcagctatccaacttgttccagaacttcaac
catcttatttcattcaaaatgacatcgtcaacatggggtcttgtacttcgcacctttgga
ggaatggtggaaatgtttcttggttcagctggaataaggcaagatccttcagggaatatt
gctgtcactgaagccacaaagcagtgcctagagattgttaggtctcttgttgatgttaat
cagagaacaatcatattatcggacaatgtgcaactgttggactttcttctcaaaacagtt
tcattctctcaaaatgttctagctccatgcttttcaagtggcattcaaggttgcgctcct
gaatctcggaagatgattcttcggagaaatagcttatgggaaattcagacaaccgctttt
accatgattagtgaaattctctcaagagttgggacttctttaccagctgaccattggcaa
tccacagttgatgctttcagaaatattattgatgtactggcaagtaagggtctgctcgtg
gaaagcaatgtaatggataggttttatacctcgcttctgcattgcctgcacttggttcta
gtaaatgctaaaggatcccttcaagaccatgttgctggttttgttgctgcactgaggatg
tttattggttatggacttactagtaaatcgcaaaatgtcttaccggcgggtgtatacaag
aaggatgccaagatctcaacccttaattctcattcttctgaatccagtagtgctccctat
aggcctccacatgtgcgcaaaaagaaccaaaaagggacgcagtcaaaagattccaactcc
ttgagcatattggactgtccacctgcaactatagattatatgtcatctgattctgattta
agtgacagtgatggatccgctaaaggtatcagcaattaccgaagctctaaggttagagta
gctgctatagtttgcatacaggatctttgtcgatctgatcccaaattgtttactgcccaa
tggacgatacttttgccctccagtgatgtgctgcaagcaaggaggtacgaagcaaacctg
atgacatgtttgctatttgatccataccttaaggcacgcattgcagctgcatttactttg
gcaaccatgttggaggggcctgcatctgtttttctccaggtggcagaatacaaggaatct
actaagttgggatcttttactgctctttccagctcacttggtcagattttaatgcagctt
cacacgggtatcctgcatttaattaagaatgaaaaaaataatggattcctgacctccttg
ttcaagattcttgccctcttgatctcatgtacaccatactcaagaatgcctgatgagttg
ttgcctacagtcatattaaatcttcatgggaggatggttgagggatttcttacatataat
gatcaaactgggctgctggctgttgctctaagttgcttaatggatgctttatctgtctcg
ccttcttcgctcaaagtgaatgaaatgttagtagcggaactatctacaggttccaacaat
aataaagcatgttctggtcttctttctactttgtttcattattctcgaccatttacaagc
ccagctgttagccttgaggctctccaggttcttaaagctgtggcacacaattacccagat
ataatggttctttgctggaaacaagtctcttccatcatttgtgaatttttggaccctctt
cttcctgaaggctcatcaagggctgggacagtaaattctggacaaactgttgggacaatt
ggggaaaaagttataaccagtgcaatcaagctgctggatgaatgtcttcgtgctatctgt
ggatttaaaggaacagaagatctttctgatgataaactacttagcagcccttttacatat
gattacgtcaaagtaaagatgatatcatctgctccatcatatggactggagaaccaacta
gtagctagcgatgatcatccagcttgtgcgactggcagccagcagtggtgtgaagctatt
gaaaagcatttatcatcaactctctttcatagttcagccatgatgagggctgcatcagtt
acttgttttgctggaataacgtccagtgttttcgtttcccttccggaggacaagcagcat
cagattatcacttattctatcaatgctgcttttgatgatgaggtcccatcagtaagatct
gctgcttgtcgtgccattggcgtaattgcatgttttccacaagtttttaagagtgtggag
atcctttgcaagtttattaatgctgctgaagtcaatagccatcattctctggtctcggtt
cgcattgcagcctcctgggctttagctaacttgtgtgattctctccgccactttgttgat
agatttacatccacagggtcttctggagatctgatggattgctctaggatggtttctttg
ctcattgattgttctctgcggcttacaagggacggtgataagatcaaagcaaatgccgtg
agagcccttggtaatctatcaagatttgttccttgttcaagccatggtcatggcatgcaa
gagtacaatacaagctttcatatagacactgaacatgctggaaagtctccaaaccatgtc
tctgcagaaactgaaagatgtctcgtatccacttcatttctgcaaagaacgtgggaagac
tcacgttggttggaaagaatggtgcaggcatttctttcttgcgttacaactggaaatgtg
aaggtacggtggaatgtttgccatgcattgagcaacttatttcttaatgagacattaaaa
ctgcaagatacagattgggctccttcagtttttagtattctgttactactgctccgcgat
tcttctaatttcaagatcaggatacaagctgcagctgcattggctgccccagcaacaaca
ctggattatggggagtcatactcagatgttgttcaaggggtcgagcacacactagagaat
cttggtacagaccagatgtttgctccttcaagttttaaatatagggttgcacttgagaaa
cagctaacatcaaccatgttgcacctccttgggcttgcttcagtaactcatcgtcatcac
tctgtacacgatttccttatcaagaaagcatcatttcttgaggaatggcttaggtcacta
tgtttatctcttgtgaaccaattcgaagctgaacatgattccacttggtaccaaaagaaa
gaggtaataaatagagcgatacagtcacttgttaaggtttatgaaagccagaatcatcag
gccatggctcaaaggttcgaaaagctggtgaacaaattagtgtaa
DBGET
integrated database retrieval system
