Cynara cardunculus var. scolymus (artichoke): 112528292
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Entry
112528292 CDS
T05604
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112528292
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112528292
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112528292
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112528292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
RTP
Motif
Other DBs
NCBI-GeneID:
112528292
NCBI-ProteinID:
XP_024995063
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Position
LG 1:14269299..14271565
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AA seq
562 aa
AA seq
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MAVGVRTGRGGGGSVFSSALRNFFSYRIFVSAMFTLLFLATASILFSSHHAHFSENSKMQ
TTGRAYMHRTFLTLKSDPLKTRLELIHKQASDYIVLVNAYAAYARKFKLEISKQLKMFED
LAQNFSDLGMKPAYHDALFETDGPLDEEVLRQFEKEVKDKVKVARLMIAETKESYDNQLK
IQKLKDTVFAVQELLIKAKKNGAFASLIAAKSTPKSLHCLDMRLMGEQIASPEKYRDEEP
KPEFEDPSLYHYAIFSDNVIAVSVVVNSAVKNAEEPWKHVFHIVTDKMNLAAMKVWFKMR
PVEGGAFVEVKAVEEYTFLNSSYVPVLRQLESANMQKLYFKNEPENTTKDANNNLTFRNP
NYMSLLNHLRFYLPEIYPKLHRILLLDDDVVVQKDLTALWKLDMDGKVNGAVETCFGSFH
RYAQYLNFSHPLIRDKFNPKACAWAFGMNIFDLDAWRRERLTDRYHYWQDLNEDQTLWQL
GTLPPGLITFYSRTKSLDKKWHVLGLGYNPSISMDDISNAAVIHFNGNMKPWLDIAMNQF
KHLWTKYVDSEMEFVQMCNFGL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcggttggtgtacggaccggcagaggcggcggaggatctgtgttttcctccgcccta
cgcaactttttttcttaccggatcttcgtctccgctatgtttactctccttttcttggcc
acggcctccatacttttctcttcccaccacgcacatttctctgagaactctaagatgcaa
acaactgggagagcatacatgcacaggacctttctaacattgaaatcggatccgttaaag
actaggttagaattgatacataagcaagccagtgattatattgtgcttgtgaatgcatat
gctgcttatgcaaggaagtttaagctcgagatatctaaacagcttaagatgtttgaggat
ctggcgcaaaacttctctgatttgggtatgaaaccagcatatcatgatgcattatttgag
actgatgggccgttggatgaggaagtcttgagacaatttgagaaggaggtgaaggataaa
gtcaaggttgctaggttgatgattgctgagacgaaagaatcttatgataatcagttgaaa
attcagaagttaaaagacacagtatttgcagttcaagagttgctaattaaagccaagaag
aatggtgcatttgctagcttaattgctgctaaatcaacgccaaagagtttgcattgtctt
gatatgcgtctcatgggggaacagattgcgagtccagaaaaatatagagatgaggagcct
aaacctgagtttgaggatccatcactgtaccattatgcaatattttcagataatgtgatt
gcagtatctgttgtggttaactcagctgtaaagaatgctgaagagccatggaaacatgtt
ttccacattgtcacagataagatgaatcttgctgcaatgaaggtttggtttaaaatgagg
ccagtagaaggtggtgcttttgtggaggtgaaagcagtggaagagtatactttcttgaac
tcctcatatgtccctgttcttaggcaattagagtctgcaaatatgcagaaattatacttc
aagaatgaaccagagaatacaacaaaggatgctaacaacaacttgacatttaggaaccca
aactatatgtcattgttgaatcaccttaggttttacttgccagagatatacccaaaactg
caccgtatattgttattagatgacgatgttgtggttcagaaagatttgaccgcactgtgg
aaacttgacatggatggaaaagtgaatggggctgttgagacctgcttcggatcctttcac
cgttatgctcagtatttgaacttctcccacccgctgattagagataagttcaatccaaag
gcctgtgcctgggcttttggcatgaatatatttgatcttgatgcttggaggcgtgaaaga
ttaactgatcgctaccattattggcaggatctgaatgaggaccagactttatggcaattg
gggacactcccacctggactaatcaccttctactcaagaacaaaatcattggacaaaaaa
tggcatgttcttggtcttgggtacaatccaagtataagcatggatgatataagtaatgct
gctgtgattcatttcaacgggaacatgaaaccttggctcgacattgccatgaaccagttc
aagcatctgtggactaaatatgtggatagtgaaatggaatttgtgcagatgtgcaacttc
ggattatag
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