Cynara cardunculus var. scolymus (artichoke): 112528328
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Entry
112528328 CDS
T05604
Name
(RefSeq) protein VAC14 homolog isoform X1
KO
K15305
vacuole morphology and inheritance protein 14
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vac14_Fig4_bd
Vac14_Fab1_bd
HEAT_GCN1
HEAT
HEAT_EF3_N
HEAT_EZ
TOR1L1_N
Cnd1
TPR_DNAAF5
HEAT_2
TPR_IPO5
RTP1_C1
HEAT_MROH2B_C
TPR_CAND1
CLASP_N
HEAT_DAAF5
HEAT_GCN1_C
ECM29_N
PIK3R4-like_middle
Arm
DNA_primase_lrg_N
Parvo_NS2
Motif
Other DBs
NCBI-GeneID:
112528328
NCBI-ProteinID:
XP_024995107
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Position
LG 15
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AA seq
730 aa
AA seq
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MADALSAIPAAVLRNLSDKLYEKRKNAALEVEGIVKQLTAAGDHDRITAVINLLTHEYTY
SPQANHRKGGLIGLAAATVGLSAEAAQHLEQILPPVINSFSDQDSRVRYYACEALYNIAK
VVRGEFIFHFNKIFDALCKLSADSDPNVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRE
RMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSE
FLQEIKNSPSVDYGRMAEILVQRAASPDEFTRWTAITWINEFVKLGGDQLVPYYADILGA
ILPCIADKEEKIRVVARETNEELRAIKAEPAEGFDVGAILSIARRQLSSEHEATRIESLH
WISSLLNRHRSEVLSFLHDIFETLLKSLSDPSDQVVLLVLEVHAAIAEDQYNFRQLVVFL
VHKFRMDHALLERRGALIIRQLCVLLDAERVYRELSKILEGEADLDFASTMVQALNLILL
TSSELSDLRDLLKLSLVDAAGKDFFLSLYASWSHSSMAIISLCLLAQAYQHASSVIQSLT
EEDINVRFLVQLDKLIHLLETPIFAYLRLQLLEPGRYIWLLKSLYGLLMLLPQQSAAFKI
LRTRLKTVPSYSFNKEQIRRTSSGNPSAHTGYMSTGIHFSEDGSMNEDSHNVHNGINFAS
SLQQFGQMQQQHRMHSKSQARLRNSSISSKCVQEVKDVEKAEEVRGGSGGGEMSRPPSRS
SRKGPGQLVL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctttatctgccattccggcggccgtgctgcggaacctctctgacaagtta
tatgagaagcgaaaaaatgcggcgcttgaggttgaaggaattgtgaagcaattgacggct
gctggagatcatgataggattactgctgtgataaatttattgactcatgagtacacttac
tccccccaagcaaatcaccgcaagggagggttgattggattggctgcagctactgttggt
ttgagtgctgaagctgcacaacatctcgagcaaattctaccaccagtgataaactctttt
tccgatcaagatagcagagttcgctattatgcttgtgaagctttatacaacattgcaaag
gtggtgagaggagagttcatttttcactttaacaagatatttgatgcgttatgtaagctt
tcagcagactcagatcccaatgtacaaagtgctgcccatcttttagatagacttgtgaag
gacatcgtgacagagagtgatcaattcagcattgaggaattcataccattgttgagagag
cgtatgaacgtgttgaatccttacgttcgccagtttttggtgggatggatcacggtatta
gacagtgttccagacatagatatgctgggctttcttcctgattttcttgatggtttattt
aatatgttaagtgattccagccatgagatccggcaacaagctgattcagcactttcagag
tttcttcaagagattaagaactccccgtctgtagactatggtcgcatggctgaaatactt
gtacagagagcagcttcccctgatgaatttactcgttggacagcgataacatggataaac
gagtttgtaaaacttggcggagaccagcttgtaccctattatgctgatatattgggagct
atcttgccttgcatagcagacaaagaagagaaaatacgagttgtagctcgtgaaactaat
gaagagctccgtgcaatcaaggctgagcctgctgaaggatttgatgttggagcaatcctc
tcaattgcaagaaggcagttatctagtgagcatgaggctactcggattgagtcattgcat
tggatttcatcccttttgaatagacaccgttcagaggtcctgtcttttctgcatgatatt
tttgaaacacttctgaagtcactatcagatccctcagatcaggtagtgctcctggtgctg
gaggtgcatgcagccatagcggaagaccaatataacttccgccagcttgttgttttctta
gttcataagttccggatggatcatgctctcctggaaaggcgtggtgctttgattattcgc
caactttgtgtacttttagatgctgaaagagtttaccgggagctctccaagattctcgag
ggggaagcagacctggattttgcatctactatggttcaggctctaaatttgatcttgctt
acttcttctgagttgtctgacctacgagatcttttaaagctgtcactagttgatgctgct
ggaaaagacttctttctttcgctatatgcctcatggagccattcatcgatggccataata
agtctctgcttattagcacaggcttaccagcatgcaagttctgtcattcaatctctaacc
gaggaggatattaacgtcagattcttggttcaactggacaaattgatacacctattagaa
actcccatttttgcttaccttaggctgcagcttcttgaacctggaagatatatatggttg
ttaaaatccctctatggtcttctgatgttacttcctcagcaaagtgctgcatttaagatc
ttaaggactcgtttgaagacagtaccctcgtattccttcaacaaggagcaaatcagacgt
acatcatcagggaacccttctgcacatactggttacatgtcaacagggatacatttctcg
gaagatggtagcatgaatgaagattctcataacgtgcataatggaataaactttgcatct
tcgctgcaacaatttggacagatgcaacagcagcatcgcatgcattcaaaatcgcaagca
cggttacgcaacagttccatatcctcaaagtgtgtgcaggaggtgaaggatgtggaaaaa
gcggaagaagtgaggggaggttcgggtgggggagagatgagcaggcctccttcaagatcc
tccagaaaaggtccaggacaactagtcctatga
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