Cynara cardunculus var. scolymus (artichoke): 112528360
Help
Entry
112528360 CDS
T05604
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00040
Pentose and glucuronate interconversions
ccav01100
Metabolic pathways
Module
ccav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112528360
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
112528360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Talin_R4
Motif
Other DBs
NCBI-GeneID:
112528360
NCBI-ProteinID:
XP_024995144
LinkDB
All DBs
Position
LG 15:21014197..21016157
Genome browser
AA seq
560 aa
AA seq
DB search
MDDGKRKFTMIGMAIVFLTAAVIAAVIGLQKYYGSDDDSHESISSTNKAVDSLCQHTDYK
RSCHKSLAHANNTDDPKELVKVAFNSAITEVQSAIDGSSTLKEVAEDPRASKALDLCKEL
LNTSIDDLKRSFKKLENFDLARMEEYVGDLKSWLTGSLTYQETCREGFKNTTDETGQKMK
KLLKLGGRLTSNVLAMVNSIIETLGEVQFTGVSRRLLDKGLNDEHGWWVSSERRLLLAAD
PKTLRPNAVVAQDGSGTFKTIMDAVRAAPKKGTRPFVILIKQGIYKEHVDIPRRVNNVVL
IGEGPTITRITGNKNYVDGVATYRTATVAVSGDGFMAKDIGFENTAGPQKHQAVALRVSS
DLAILHNCAMEGYQDTLYAHSYRQFYRQCKITGTIDFIFGNGAAVFQDCKMIVRKPLANQ
ACMVTAQGRKDHNSKGALILQGCNITADKEYMATKPMPSSYLGRPWKAYSQTIIMQSFID
RNIAPEGWAPWVGTFGLDTCYYSEFNNRGPGADTRRRVTWKGIKMMSLKEADSYTPAKYI
QGDIWIKGTGVPYDPGMMSL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggaaaaaggaagttcaccatgatcggaatggccatcgtctttttaacggcg
gcggtgattgctgcagttattggtcttcagaaatactatggttccgacgatgattcccac
gaatcgatttcgtcaaccaacaaggcggtagactcactttgccaacataccgattacaag
agatcatgtcacaagagtcttgcccatgcaaataacacagacgaccctaaggagctcgtg
aaggtggcttttaattctgcaataacagaagttcagtccgccattgatggatcatcaacc
cttaaagaagtggctgaagatcctagagcttctaaagcattggatctatgtaaagaactt
ctcaacacctccattgatgaccttaaacgatccttcaaaaagctcgagaatttcgatctt
gcaagaatggaggaatatgttggcgatcttaaatcgtggctcactggttcactgacgtat
caagagacttgccgcgaagggttcaagaacacgaccgatgaaacaggtcagaagatgaag
aagttgttgaaattgggtggccggctcaccagcaatgtgctcgcaatggtgaatagcatc
attgagacccttggggaggttcagttcaccggggttagccgtaggctcttggacaagggt
ctgaacgatgagcatggttggtgggtcagcagtgagaggcggttgttgcttgctgctgat
ccaaaaacgttaaggcctaatgcggttgtggctcaggatggttcaggaacctttaagacc
atcatggatgcggttagggccgcgcccaaaaaaggcacccgaccctttgttatactcatc
aaacaaggtatttacaaggagcatgtcgacattcctaggcgtgttaacaatgtcgtctta
atcggcgaaggtccaaccataaccagaatcaccggaaacaagaactatgttgatggagtt
gcgacttataggaccgctaccgttgcggtgagcggagatggcttcatggcaaaggacata
gggttcgagaacacagcgggaccacaaaagcatcaggcggtcgcgttacgtgtctcgagc
gacttagccatcttgcacaactgtgccatggaaggataccaagacaccctctacgcccat
tcatatcgccagttttaccggcaatgcaaaatcacaggaaccatcgacttcatctttgga
aacggagcagccgtcttccaagactgcaagatgatcgtcaggaaaccccttgccaaccaa
gcgtgcatggtgacagcccaggggcggaaggaccacaactcaaaaggtgcactgatcctc
cagggctgcaacatcacagccgataaagaatacatggccaccaagccaatgccaagttct
taccttggtcggccatggaaagcgtattcccaaaccatcatcatgcagtcgttcatcgac
cgcaacattgcaccggaagggtgggccccgtgggtcgggacgtttgggctcgacacgtgt
tattacagcgagttcaataatagaggaccaggggctgacacaaggagaagagtgacatgg
aagggcatcaagatgatgagtctaaaagaagctgatagttatactcctgcaaaatacata
caaggagatatatggataaaaggaactggtgtgccttatgatcctggcatgatgagtctc
taa
DBGET
integrated database retrieval system
