Cynara cardunculus var. scolymus (artichoke): 112528489
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Entry
112528489 CDS
T05604
Name
(RefSeq) alpha-amylase 3, chloroplastic
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112528489
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
112528489
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Radical_SAM
Asparaginase_2
Motif
Other DBs
NCBI-GeneID:
112528489
NCBI-ProteinID:
XP_024995287
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Position
LG 15:complement(8351197..8358798)
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AA seq
900 aa
AA seq
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MATVPLGAHLHHCCRLEIPKFTINSRKSKQSSLYYSRKGSFMLKNGANSCNSRPSSDSRI
PTTTVRASSNSSSSDTALLDAAVSDDVIFRESFPLQRIEKVEGKILIRLDSGKDEENWQL
IVGCNLPGKWVLHWGVTYVNDIGSEWDQPPVEMIPEDSISIKDYAIETPLTKSSTVTEAD
SIYEVKIDFNTKSSIATINFVLKDEETGSWYQYRGRDFKVPLMAFSTDDGNAVGTKQGFA
VWPGSSGQLSSMLIQSDGEGENKSDDSKESIQQKRSLQSFNEEHYIIKETLLENSMNVYM
KRCSEASSNLLRIETDIPGDVIVHWGVCKDESKKWEIPVGPYPANTSVFKNKALRTQLPI
KEDGQGCSGVFSLDEETTGFLFVLKLKDDTWINCMGNDFYIPIPKESIEGPGENNISGSD
VEVDQEVSVYTNDIINEIRHLVTGISGGANQKTKGKEAQETILQEIEKLAAEAYGIFRSS
VQSIPEVESDAEDVEDHVKVSSAVGSGFEILLQGFNWESNKSGRWYLELEEKVEELASLG
FTIVWLPPPTESISPEGYMPRDLYNLNSRYGSVDELKALVKKFHKAGLRVLGDAVINHRC
AHYQNKNGVWNIFGGLLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDL
GEWLRWLRKEIGYDGWRLDYVRGFWGGYVKEYMETSEPYFSVGEYWDSLSYTYGAMDHNQ
DAHRQRIIDWINATNGTAGAFDVTTKGILHSAIERCEYWRLCDSNGKPPGVVGWWPSRAV
TFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPSVFYDHLFSHHKSDISALISIRNR
NKIQCRSTVRVTKTERDVYAAIIDEKVAMKMGPGHYEPESGSLNWSVAYEGNDYKVWEAS
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggttcctcttggggctcatctccaccattgttgtcgcttagaaatccctaaa
tttaccatcaattccagaaaatctaaacaatcttctttgtattacagtaggaaagggagt
tttatgctaaaaaatggcgccaacagctgcaactccaggccttcttctgattctaggatt
ccgaccaccacagtaagagcttcttctaatagctccagctccgacaccgctctccttgat
gcagccgtgtccgatgacgtcatcttccgagaatcgtttccattgcaacgcatcgaaaag
gtggaaggaaagatattaatcagattagatagtggaaaggatgaggagaactggcagcta
attgtaggatgtaaccttccagggaaatgggttcttcattggggagttacttatgtcaac
gacattggcagtgaatgggatcagcctcctgttgagatgatacccgaggactctatttcc
ataaaggactatgcaattgagacccctttaacgaaatcgtcgacagtgacagaagcagat
tcaatttacgaagtgaaaattgattttaacactaaaagctcaattgccactattaatttt
gtcttaaaggatgaagaaactggatcttggtatcaatacagagggagagattttaaggtg
ccacttatggctttctccactgatgatggcaatgctgtaggaactaaacagggttttgcc
gtatggccagggtcttcagggcagttatccagcatgctgatccaatcagatggcgaaggt
gaaaataaaagcgatgactcgaaagaatctattcagcaaaagaggagccttcagagtttc
aatgaagagcattacattataaaagaaaccctgcttgagaactccatgaatgtttacatg
aaaagatgttccgaggcatctagtaatcttctgcgcatagaaactgatatccctggtgat
gttattgttcattggggagtctgcaaggatgagagtaagaagtgggaaattcctgttgga
ccgtatccagctaatacatcagtatttaagaacaaggctttgcgtactcaattgccgata
aaagaagatgggcagggctgctctggagtattttcattagatgaagaaacgacaggattc
ctttttgttttgaaacttaaagatgacacatggattaattgtatggggaatgatttttac
ataccgatcccaaaggaaagtatagaaggtcccggagaaaataatatctctgggagtgat
gtggaagtcgatcaagaagtttctgtatatactaatgatatcatcaatgaaatcagacat
ctggtaactggcatatccgggggagcaaaccaaaaaacaaaaggcaaagaggcacaagaa
accattcttcaagagattgaaaagttagctgcagaagcctatggtatcttcagaagctct
gttcaaagtataccagaggtcgagtctgatgctgaggatgtcgaggaccatgtaaaagta
agttcagcagttggttcaggttttgaaattctgttacaaggatttaattgggagtccaac
aagtctggaagatggtatctggaactagaagaaaaagtggaagagttggcctcacttggc
ttcaccattgtttggttgcccccaccaacagaatctatctcacctgaaggctacatgcca
cgggatctatataatttgaactccaggtatggaagtgttgatgagttgaaggcacttgtg
aagaaattccataaagctggtcttagggttctcggggatgcagtcataaatcatcgttgt
gcacattatcagaacaaaaatggcgtttggaatatttttggtggtctattgaattgggac
gatcgtgcagttgttgcggacgatccgcattttcaggggcgaggaaacaagagtagtgga
gataatttccatgctgctccaaatattgatcattcacaagagtttgtgaggaaagatctt
ggtgaatggctacgctggcttaggaaagagattgggtacgatggatggaggctggattat
gttaggggattttggggtggttatgtaaaggagtatatggaaactagtgaaccctacttt
tctgttggtgagtattgggattctctaagttacacgtatggtgcgatggatcacaatcaa
gatgcccatcggcagaggattattgactggataaatgctaccaatggaactgctggagcc
tttgatgtcacaacaaaaggaattcttcattctgcaattgaaagatgtgaatactggaga
ttatgtgattcaaatggaaaaccaccaggtgttgttggctggtggccctctcgtgctgtc
acctttatcgaaaatcatgatactggttctacacagggtcactggcggtttcctggtgga
aaggagatgcaaggatatgcttacatcctgactcatcctggaacaccatcggtcttctac
gaccatttgttctcccaccacaagtccgatatttctgcacttatctcgattaggaaccgc
aacaagatccaatgccggagtacagttagagtgaccaagacagaaagagatgtttatgca
gccataattgatgaaaaggtggcaatgaagatgggaccgggccattacgaacccgaaagt
gggtccctcaactggtcggtggcgtatgaaggcaacgattacaaggtatgggaagcatca
taa
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