Cynara cardunculus var. scolymus (artichoke): 112528623
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Entry
112528623 CDS
T05604
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112528623
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112528623
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112528623
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112528623
03041 Spliceosome [BR:
ccav03041
]
112528623
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112528623
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
112528623
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112528623
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112528623
Spliceosome [BR:
ccav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112528623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
112528623
NCBI-ProteinID:
XP_024995410
LinkDB
All DBs
Position
LG 15:complement(17451441..17455614)
Genome browser
AA seq
317 aa
AA seq
DB search
MEDKVLDKFIKKLLDAKVGSVPKQAVLSESEIRKLCVVSRDVFLSQPNLLELKAPIKICG
DIHGQYVDLLRLFEFGGHPPKSNYLFLGDYVDRGKQSIETICLLFAYKIKYKDNFFLLRG
NHECASINRIYGFYDECKRRLNVRVWKMFSECFNCLPIAAIIDEKILCMHGGLSPDLKRL
DQLRNINRPIDIPDEGLLCDLLWADPDKDVKGWGVNKRGVSYTFGADKVTEFLQKHGLEL
ICRAHQVVEDGYEFFANRQLVTLFSAPNYCNEFDNDGAMMNVDEMLTCSFQILKASPKKG
MIGFGKYMVSPATPHTR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaggataaggtgctcgacaaattcatcaagaagcttttagatgctaaggttggatct
gtgccaaagcaggcggtgctttcggagtcggagattcggaaactttgtgtcgtttctcga
gatgttttccttagccagcctaatttgctcgagcttaaagctccgatcaagatctgcggc
gacatccatggacagtatgttgatctcctacgattgtttgagtttggagggcacccaccc
aagtcaaattacttgtttttgggagactatgttgatcgtggtaagcagagcattgaaacg
atttgcctactattcgcatacaagataaagtacaaggataacttctttcttctccgggga
aaccatgaatgtgcttccatcaatcggatatatggattctatgatgaatgcaagagaaga
ctcaatgttcgtgtttggaaaatgttttctgaatgcttcaactgcctacctattgctgct
attattgatgaaaagatactttgtatgcatggaggattgtcacccgacttgaaaaggttg
gatcaactacggaatataaatcgtcccattgacattccagacgaggggctactatgtgat
ttactgtgggctgatcccgataaagatgtgaaaggatggggagtaaacaaaaggggtgta
tcctacacatttggtgctgataaggttacagaatttctccaaaaacatggtcttgaacta
atctgtcgagctcatcaggttgttgaagatgggtatgagtttttcgctaaccgacagcta
gtaaccctgttctctgcaccaaattactgtaacgagtttgataatgatggagcaatgatg
aatgtggatgaaatgttaacttgttcctttcaaattctaaaagcttcaccaaagaaaggg
atgattggttttggcaaatatatggtatccccagcaacaccacacacaaggtaa
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integrated database retrieval system
