Cynara cardunculus var. scolymus (artichoke): 112528655
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Entry
112528655 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112528655
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112528655
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112528655
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112528655
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112528655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
112528655
NCBI-ProteinID:
XP_024995445
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Position
LG 15:19509552..19514530
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AA seq
755 aa
AA seq
DB search
MADSVHHPLSQSPSFFKSFSCPKDSLSPTQTLDLDPHLSSRRSKLHDHARSRMLFDEIAQ
QQEENMENSNSLESQYQKDDDLLMSNEVLEDSDQPLLSPSGAEPNTLSEPLSPLALDDSA
NNLVDETDAWISYNRSQTEVYKPFPSVASSSSSWYEEAYEKPCMVGAGLANLGNTCFFNA
VLQCFTHSVLLVQGLYSYTHPTPCDCSNERFCLICALREHIENSLSSTGKIVSPWKFVDN
LSYFSSSFQRYQQEDAHEFLQCFLDRLESSLNNLKVKDDAVSLQSDNLVKQVFGGCVVSK
LRCCNCNYISDTYEPSVDLSLEIEDAISLSTALESFTKVEHIEDEEMRFTCDQCKEKVSV
EKQLMLDQTPPICAFHLKRFKNDGSYVEKIDKHVEFPLELDLQPYTCGRQSNNEDLKYEL
NAVVVHAAFTSSCGHYYCYIRSAPDTWYKFDDSKVTSVSEACVLSEEAYILFYARQGTTW
FSNFMETYKPSLDPNLSNTSPKSVLENVDHTSTSADAVHSHEINESCSNKVAAPGVKDRS
FQSGTMVPSKSSNFSDLNASNPHVLKEKSPLTLKEYGSNHMPEVEKNTGVTPSRHNRLQG
AADSEDDPNRAFSTPFVRPSDGKTTTFDISQVVSPSTPPRSPGLDSSDDENSEVVFAPKA
DQLKLVEKPSYKRQRSKDVEDSVKHEALRQCKRMPSARGNLLMAALEMGPKSENSVNKRS
KKIASPPRKKYSRSSEGFRHDDKSISRNLATSSFR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctgttcatcatcccttgtcccaatcaccttcttttttcaaatccttctcc
tgccctaaagattctctttcccctactcaaaccctagacctagatccacacttgagctct
cgtcgctctaaactccacgatcacgctcgctctcgtatgttgtttgatgaaatagcccaa
caacaggaggaaaatatggagaattccaactcactagaatcgcagtaccaaaaagatgat
gaccttttgatgtcaaacgaagttctcgaagattctgaccaaccgttgctatctccttct
ggtgctgaacctaatactctctctgagcccttgagccctctggctcttgatgatagcgct
aataatcttgttgatgagactgatgcctggatttcgtataatcgaagtcaaaccgaggta
tacaagccctttccttcagttgcctccagttcttcgagttggtacgaagaagcctacgag
aagccgtgcatggtgggtgcagggcttgcgaatctgggcaacacttgctttttcaatgca
gttttgcagtgtttcactcactctgtgctacttgttcaggggctatattcgtacacccat
ccgacaccttgtgattgtagcaacgaacggttctgtttgatctgtgctttgagggagcac
attgaaaattcattatcatcaactggaaaaattgtctcaccctggaaatttgtcgacaat
ttgagctatttttcatcatcatttcaaagatatcaacaggaagacgctcatgagttcttg
caatgctttctggatagacttgaaagctctttaaacaatttgaaagtgaaggatgatgct
gtctccttgcaaagtgacaatttagtcaagcaagtctttgggggttgtgttgttagcaaa
ctaagatgttgcaactgcaattacatttctgatacctatgagccttcagttgacctcagt
ttggagattgaggatgcaattagtctttcaactgctcttgaatcatttacaaaagttgaa
cacattgaagatgaagagatgaggtttacatgtgaccagtgtaaggaaaaggtctctgtt
gagaaacaacttatgctggatcagacccctcctatatgtgctttccatttaaagagattc
aaaaacgatggctcttatgtggagaaaatagacaagcatgtggaatttcctctagagttg
gacttgcagccttatacatgtggccgtcagagtaataatgaggatttgaagtatgagtta
aatgcagttgttgtacatgcagcctttacatctagttgtggtcactactactgttacatt
cggtctgcacctgacacatggtacaagtttgatgactcaaaggttaccagtgtttctgag
gcttgtgtgctttcagaagaagcatatattctcttctatgcaagacaaggcacaacttgg
ttttcaaacttcatggaaacatataagccttccttggatccaaacttatcaaatacttca
cccaaatcagtactagagaatgtcgatcacacctctacgtctgctgatgcagttcattcc
catgaaattaatgaatcatgtagtaacaaagttgcggctcctggagtgaaagatcgttct
ttccaatctggcactatggtgccatccaagtcaagcaatttttcggacttgaatgcttca
aaccctcatgttttaaaagaaaaatctccattgacccttaaagagtatgggtctaaccac
atgccagaagttgagaagaatacaggtgttactcccagtaggcataataggcttcagggg
gctgctgattctgaagatgatcccaacagagctttctctacaccatttgtaagaccaagt
gacggaaaaaccactacatttgatatcagccaagtagtttctccgtcaacaccaccaaga
tctcctggactggattcttctgatgatgagaattcagaagtggtttttgctccaaaggct
gatcaattgaaacttgtggagaaaccatcgtacaagaggcaacgaagcaaggatgttgag
gattccgtgaagcatgaggctttgagacaatgcaagaggatgcctagtgcaagaggaaac
ttgttaatggctgcacttgagatgggaccgaagagtgaaaactcagtgaacaagagaagc
aagaaaatagcttcacctccaagaaagaagtacagccgatcgagtgagggttttaggcat
gatgacaagtcgatctcgcgtaacttggccacttcaagttttcggtaa
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