Cynara cardunculus var. scolymus (artichoke): 112528678
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Entry
112528678 CDS
T05604
Name
(RefSeq) adagio protein 3 isoform X1
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112528678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112528678
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112528678
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
PAS_9
Kelch_6
Kelch_1
PAS_3
PAS
F-box-like
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
112528678
NCBI-ProteinID:
XP_024995470
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Position
LG 15:4598872..4601812
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AA seq
635 aa
AA seq
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MGILRDDDSEDRRRTKRIKCHDHQNDYDYDYDHEFGDVEEEEESGTGFSLRLGDFFNPMI
PTSIVVSDAMEPDFPIIYVNKVFESITGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVC
VSEIRRCLDEDIDFQGELLNFRKDGTPLVNRLRLAPIHGDDGIVTHIIGIQVFTEAKIDL
NSVSYPVFKETCKKQCDQETGKYSPKSGEMKYIESQEICGILQLSDEVMAQNILSRLMPR
DVASIGSVCTRIRQLTKNEHVRKMVCQNAWGRDVTGALEHMTKKLGWGRLARELTTLEAV
CWKKLRVGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWRQVSV
KSAPPGRWGHTLTCLNGSWLVIFGGCGKQGLLNDVFILDLDAKQPTWIEVFGGGGQPPPR
SWHSSCTIEGSKLVVSGGCTDAGILLNDTFLLDLTMEKPMWREIPASPIPPSRLGHSLSV
YGRTKILMFGGLANSGHLRLRSSEAYTIDLMDEKPEWRLLECNGFTGVGTQSAVVPPPRL
DHVAMSMPCGRVIIFGGSIAGLHSPAQVFLLDPAEEKASWRLLNVPGQPPKFAWGHSTCV
VGGTRVLVLGGHTGEEWVLNELHELCLASKQDVEP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggggattcttagagatgacgactcagaggatcgccggaggaccaagagaatcaaatgc
cacgaccatcagaatgactacgactacgactatgaccacgagttcggtgatgtagaagag
gaggaagagagtggtactggattttcgttgaggttaggtgattttttcaatccgatgatt
ccgacttctattgtcgtttcggatgctatggaaccggattttcctataatctatgttaat
aaagtcttcgaatccatcaccggttatcgcgccgatgaggtccttggccggaactgccgt
ttcttacagtacagagacccccgagcccaaagacggcatcctttggtagaccctgtttgt
gtttcagagatcagaagatgtcttgatgaagacattgattttcagggagagcttctgaac
ttcagaaaagatggtactccactggtgaaccggctaagacttgctcccatacacggtgat
gatggcatagtcacacacataataggcattcaggtatttactgaagccaaaatcgatcta
aatagtgtttcataccctgttttcaaagaaacttgcaagaagcaatgtgatcaagagacg
ggtaaatactccccaaagagtggagaaatgaagtatatagagagccaggagatatgtgga
attcttcaactttctgatgaagtaatggctcaaaacattttgtcacgcttgatgcctaga
gatgttgcttcgattggatccgtttgtacaaggattcgtcaactgaccaagaacgagcat
gtcagaaaaatggtgtgccaaaatgcttggggaagagatgtaacgggtgcattggaacac
atgacgaaaaaactagggtggggccgtcttgctcgggaactcaccactcttgaagctgtt
tgctggaagaaactcagagtcggaggcgcggtagagccttcacgctgcaatttcagtgcg
tgtgctgctgggaacagactcgttctctttggaggcgaaggcgttaacatgcagccaatg
gatgatacgtttgtcctcaatctcgatgctgcaaatcccgagtggcggcaggtgagtgtg
aagtcagccccaccaggtcggtggggccacacgctaacctgtctcaatggatcttggcta
gtcatattcggtggctgtggaaaacaaggattgctcaatgacgtcttcattctcgacctc
gacgccaaacagccgacatggatcgaagtctttggcggtggtggtcaaccgccaccccga
tcctggcacagctcatgcaccatagaagggtcgaaactagtcgtctccggtgggtgcacc
gatgccggaatccttctcaacgacacatttttgctcgatctcacgatggaaaaaccaatg
tggagagagattccggcctccccaatcccaccatctcgactcggacattcgctctccgtt
tacggacggaccaagattcttatgtttggtgggctagccaacagcggtcacctaaggtta
agatcaagtgaggcatataccatagacctgatggatgaaaagcctgaatggaggctattg
gaatgcaatgggttcacaggggttgggacccagagtgcagtggttccaccgccccggctg
gaccacgtagcgatgagcatgccgtgtgggcgtgttataatatttggcggttcaatagcg
ggattgcattcacctgctcaggtgttcttattggacccagcagaagagaaagcatcatgg
aggctcctaaatgtgcctggtcaaccaccaaaatttgcatggggtcatagtacatgtgtg
gtggggggtacgagggttctggtgctgggtggtcatacaggcgaagaatgggttcttaat
gagctgcatgagttgtgcttggccagcaagcaggatgtggagccatga
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