Cynara cardunculus var. scolymus (artichoke): 112528903
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Entry
112528903 CDS
T05604
Name
(RefSeq) ribosomal RNA small subunit methyltransferase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112528903
Enzymes [BR:
ccav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
112528903
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112528903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_23
PRMT5
Methyltransf_31
PPS_PS
Methyltransf_2
PCMT
Methyltransf_28
DREV
Motif
Other DBs
NCBI-GeneID:
112528903
NCBI-ProteinID:
XP_024995696
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All DBs
Position
LG 16:complement(2525703..2528651)
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AA seq
353 aa
AA seq
DB search
MAGGKIVKAKPARGGAGSSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGINSTDVILE
IGPGTGNLTKKLLEAGKSVVAVELDPRMVLELQRRFQGTPFSNRLKVIQGDVLKCDLPYF
DICVANIPYQISSPLTFKLLNHRPLFRCAVIMFQREFAMRLVAQPGDTLYCRLSVNTQLL
SRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPAPVVNFKEWDGLVRICFTRKNKTLGAIF
RQKRVLSILEKNYKTLQALQLSQGTDDQMATDASVLGDSSELTMLADDDAEDNDDDVDDM
EMDDGEKKGSEFKEKILGVLKQGEFEEKRSSKLAQADFMHLLSLFNQAGIHFS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagggaaaatcgtgaaggcaaagcctgcacgtggaggtgcggggtcttcgaat
cactatcaaggaggtatatcgttccataaatcaaagggtcagcatattctgaagaaccct
ttactcgttgattcgatcgtccagaaagctggcatcaatagcacggatgtgattcttgaa
attggtcctggtacgggaaatcttaccaagaaacttctagaagctggaaagtctgttgtt
gctgttgagcttgacccacgtatggtcctcgagttgcagcgtcgttttcagggcaccccg
ttctctaaccgactcaaggttatccaaggagatgtgctcaaatgcgatcttccgtatttc
gacatttgcgtagccaacattccgtaccagatatcatctcctcttaccttcaaactatta
aatcaccggccgttattcagatgtgcggtgataatgttccaaagggaattcgccatgaga
ttagtggctcaacctggcgacactctctattgccgcctttcggtaaacacccaactttta
tctcgcgtttcccacttactaaaagttggaagaaacaacttccggcccccaccaaaagtc
gactcgtcagttgtcagaatcgagccaagaaaaccggccccggtggtcaactttaaagaa
tgggacggtttggtccgaatttgtttcaccagaaagaacaaaaccctcggagcaatcttc
aggcagaaacgtgtactttcaattctcgagaaaaactacaaaaccctccaagcgttacaa
ctttctcagggtaccgacgatcaaatggcaacagatgcttctgttcttggagattccagt
gagttgaccatgttggccgatgacgacgccgaagacaatgacgatgacgttgatgatatg
gaaatggacgatggtgagaaaaaagggtcggaattcaaagaaaagattctcggtgtgttg
aaacaaggagaattcgaagaaaaacgatcatcgaaactcgcacaagcggattttatgcat
ttgctatcgctatttaaccaagccggaatccatttttcttga
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