Cynara cardunculus var. scolymus (artichoke): 112528917
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Entry
112528917 CDS
T05604
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1-like
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112528917
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
112528917
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
112528917
NCBI-ProteinID:
XP_024995721
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All DBs
Position
LG 1:2767753..2774650
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AA seq
718 aa
AA seq
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MFNLFRPYINRRFLISLRNFYISLTHPLFSLFSPNMNHDPQTESTDDAPQPDSTLFDPYV
PSTPVSYPIKTLQDLELRTYFDSFHFQFNKASVPLSCSGVDVVSLPNRRRMMACHDMAGG
YIDDKWVQGGSNPDAYGIWHWYLMDVFIYFSHNLVTLPPPCWVNAAHKHGVKVLGTFIVE
WEEGRLIAEQFLATTEVTQLYAERLSELAVALGFDGWLINMEVELDIGRIPILKEFISHL
TKVMHSSKPGSLVIWYDSVTIEGKLDWQDQLNDKNKPFFDICDGIFMNYSWKEDYPRSSA
AVAGNRKFDVYMGIDVFGRGTYGDGQWTTNVALDVLKKDDVSAAIFAPGWVYETKQPPDF
QTAQNRWWSLVEKSWGVMQSYPKVLPFYSNFDRGNGYHFSVDGRLVSDAPWNNLSNQSYQ
PCLEFFGDAATETIQAFVDFKQASYSGGGNITFEGVLEDHAYLTRRLFHGELRFGNSAVH
FTYSVKSDGSSVIGLLLDFTDTMDTEKTSVLLASWGDTLLTMDRFSSKFSRVIMPRHVKK
LAAEPEWIIQDSSLTMEGFTLTGIHVVCYKSNPQVGTLKSPSNSSEYYAVLGHIAIKTST
ENMVFPPASEWLVESQNIDWRSDSKGHITVSLKILWALNSGVTPVFSKYNIYVENEADKS
AQGLQHLGVALVEAFYISELSVPVGISSVKFIIQACGLDGACSELTVSPFIQLRVEGL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacctcttcagaccctacataaatcggcgattcctaatctcccttcgcaatttc
tacatttcactcacccaccctctcttctctctgttttcccccaatatgaaccacgatcca
caaaccgaatccaccgacgacgccccacaacccgattctactctctttgatccctatgtg
ccgtctacaccagtctcttacccaatcaaaactttacaagacttggaacttcgaacctat
ttcgattctttccacttccagttcaataaagcgtcggttcctctaagttgtagtggtgtt
gatgttgtttcgttgccgaatcggcggaggatgatggcgtgtcatgatatggcgggaggg
tacattgatgataaatgggttcaaggagggagtaatcctgatgcatatggaatatggcat
tggtatttgatggatgtgttcatctatttttctcataatctggttactttgccgcctcct
tgttgggttaacgctgctcataagcatggagttaaggtattgggaacttttatagtagag
tgggaggaaggaagattgattgctgagcagttccttgcaacaactgaagttacccaactg
tatgctgagcgtttgtctgagcttgctgttgccttgggctttgatgggtggctgattaat
atggaggtcgagctggacattggaaggattcctattttgaaggaatttatcagccattta
actaaggttatgcattcttcaaaacccggatctttagttatctggtatgacagtgttact
attgagggtaaacttgattggcaagatcaactgaatgataagaacaagcctttttttgat
atatgtgatggcatatttatgaactattcctggaaggaagattatccaaggtcctcggct
gctgttgctggtaatagaaagtttgacgtctacatgggaattgatgtttttggtagaggc
acttatggtgacggacaatggacaacaaatgtggcacttgatgtactaaagaaagatgat
gtgtcggcagccatatttgcccctggatgggtttacgagactaagcaaccccctgatttt
cagacggctcagaatcggtggtggagtcttgttgagaaatcatggggagtaatgcaaagt
taccccaaagttcttccattctactccaacttcgatcggggtaatggctaccatttttcc
gttgatggaagactggtgtccgatgctccgtggaacaatctttcaaatcaaagttaccag
ccatgtctcgagttttttggagatgctgcaactgaaacaattcaagcattcgttgatttt
aagcaagcatcatatagtggaggagggaacattacttttgaaggtgttcttgaagatcat
gcttatttgacaagaagactcttccatggagaacttcgttttgggaattcagcagtccac
tttacgtactcggtgaaatcagacggtagctccgtgatcggccttttacttgattttact
gacaccatggacacggaaaagacgtcggttcttcttgcctcttggggagataccttgctt
accatggatcggttttcaagcaaatttagccgcgtgataatgccacgccatgtgaaaaaa
ctagcagctgaaccagaatggatcatacaagatagcagtctcacaatggagggattcaca
ttaacaggaattcatgttgtttgctacaaatcaaatccccaagtcgggactctaaaatct
ccgtccaattcgtccgaatattacgcagttcttggtcatatcgctattaaaacttctacc
gaaaacatggttttcccaccggcctcagagtggcttgtcgaaagtcaaaacatcgattgg
agatctgattctaagggacacattaccgtttctcttaaaattctttgggcactaaacagc
ggcgttactcccgtattttctaagtacaacatttacgttgaaaatgaagcagataaatca
gcgcaaggattacagcatctcggagtagcattagtagaagctttttatatatccgagctt
tcggttccggtgggtatttcaagcgttaaattcataatccaagcttgcggtctcgatggg
gcttgctcggaactaacggtttcgccatttatccagttgcgtgttgaaggtttatag
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