KEGG   Cynara cardunculus var. scolymus (artichoke): 112529068
Entry
112529068         CDS       T05604                                 
Name
(RefSeq) autophagy-related protein 8C-like isoform X1
  KO
K08341  GABA(A) receptor-associated protein
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04136  Autophagy - other
ccav04145  Phagocytosis
ccav04156  Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    112529068
   04136 Autophagy - other
    112529068
  09143 Cell growth and death
   04156 Integrated stress response (ISR) signaling pathway
    112529068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112529068
   04121 Ubiquitin system [BR:ccav04121]
    112529068
   03029 Mitochondrial biogenesis [BR:ccav03029]
    112529068
Membrane trafficking [BR:ccav04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    112529068
Ubiquitin system [BR:ccav04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   112529068
Mitochondrial biogenesis [BR:ccav03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    112529068
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 112529068
NCBI-ProteinID: XP_024995913
LinkDB
Position
LG 1
AA seq 138 aa
MLFKCLKFAETNQSAAMVKCSFKLDHPLEKRLAESSRIREKYPDRVPVIVERAEKTDIPD
IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNMLPPTAALMSAIYEENKDEDG
FLYMSYSGENTFGFQEMQ
NT seq 417 nt   +upstreamnt  +downstreamnt
atgttgttcaaatgcttgaaatttgcagaaacgaatcagagtgcagccatggttaaatgc
tccttcaagcttgatcatcctttggagaaacggttggctgaatcctctcgcatcagagag
aagtatcccgatagagtaccggtgatcgtcgagagagcggagaaaaccgacattcccgac
atagacaaaaagaaatatctagtaccggctgatttgaccgttggtcaattcgtttatgtg
gttcgtaagaggatcaagcttagcgctgagaaggctatattcgttttcgtcaagaacatg
ctcccaccgaccgctgctttgatgtcggcaatttacgaggaaaacaaggacgaagatggg
ttcctctacatgagctatagcggcgaaaacacatttggatttcaagaaatgcagtaa

DBGET integrated database retrieval system