Cynara cardunculus var. scolymus (artichoke): 112529068
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Entry
112529068 CDS
T05604
Name
(RefSeq) autophagy-related protein 8C-like isoform X1
KO
K08341
GABA(A) receptor-associated protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112529068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112529068
04121 Ubiquitin system [BR:
ccav04121
]
112529068
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112529068
Membrane trafficking [BR:
ccav04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112529068
Ubiquitin system [BR:
ccav04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
112529068
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112529068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
112529068
NCBI-ProteinID:
XP_024995913
LinkDB
All DBs
Position
LG 1:complement(9959939..9962860)
Genome browser
AA seq
138 aa
AA seq
DB search
MLFKCLKFAETNQSAAMVKCSFKLDHPLEKRLAESSRIREKYPDRVPVIVERAEKTDIPD
IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNMLPPTAALMSAIYEENKDEDG
FLYMSYSGENTFGFQEMQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcaaatgcttgaaatttgcagaaacgaatcagagtgcagccatggttaaatgc
tccttcaagcttgatcatcctttggagaaacggttggctgaatcctctcgcatcagagag
aagtatcccgatagagtaccggtgatcgtcgagagagcggagaaaaccgacattcccgac
atagacaaaaagaaatatctagtaccggctgatttgaccgttggtcaattcgtttatgtg
gttcgtaagaggatcaagcttagcgctgagaaggctatattcgttttcgtcaagaacatg
ctcccaccgaccgctgctttgatgtcggcaatttacgaggaaaacaaggacgaagatggg
ttcctctacatgagctatagcggcgaaaacacatttggatttcaagaaatgcagtaa
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