Cynara cardunculus var. scolymus (artichoke): 112529091
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Entry
112529091 CDS
T05604
Name
(RefSeq) diaminopimelate epimerase, chloroplastic
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00300
Lysine biosynthesis
ccav00470
D-Amino acid metabolism
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
ccav01230
Biosynthesis of amino acids
Module
ccav_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
112529091
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
112529091
Enzymes [BR:
ccav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
112529091
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-GeneID:
112529091
NCBI-ProteinID:
XP_024995938
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All DBs
Position
LG 1:7637345..7642835
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AA seq
365 aa
AA seq
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MAIAATVSAPITSSNLRSHSITRPSSFSLINPFKSSSFTKLTTTSLIRNPKFGFSVSAMS
VAAQENLSQTAFLDRRESGVLHFVKYHGLGNDFIMVNNLDSMEPKVTPEQAVKLCDRNFG
IGGDGIIFAMPGSNGTDYTMRIFNSDGSEPEMCGNGVRCLAKFIADLNNSHGRQSFTVHT
GAGLIVPEIQDDGKVKVDMGEPVLKASDVPTKIPANKDQSVVKAKIEVDGVNWNVTCVSM
GNPHCITFGREGGENLVVDELNLADIGPKFERHALFPARTNTEFVQVFSRSHLKMRVWER
GAGATLACGTGACAVAVAAILEGRSERNCTVDLPGGPLVIEWREDDNHVYMTGPAEVVFY
GSVHL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgccgcaaccgtttctgcccctatcacatcttcaaatctccgatcacattct
atcactcgtccgtcctctttttctctcatcaatccattcaaatcctcttctttcaccaaa
ttgacgactacttctcttatccgaaaccctaagttcggattctctgtctcggcaatgagt
gttgcagctcaggaaaatctctctcagacggcgttcctcgatcggagagaaagcggagtt
cttcattttgtcaagtatcatggcctcggtaacgactttatcatggttaacaatcttgat
tcgatggagcccaaagttactccagagcaagctgtaaagttatgtgataggaactttggc
attggaggggatggaataatctttgctatgcctggatcaaatgggactgattataccatg
agaatttttaattctgatggtagtgagcctgagatgtgcggtaatggagttcgttgcctt
gcaaaatttattgcagatctcaataactcacatggaaggcaaagttttactgtacatact
ggtgctggcctcattgtacccgagatacaagatgatgggaaggttaaagttgacatgggt
gagcctgtcctgaaggcctcagatgttcccactaaaataccagcaaataaagatcaatct
gttgtgaaagcaaaaattgaagtagatggagtgaactggaatgtcacgtgcgtcagcatg
ggaaatcctcactgcatcacttttggtagagaaggaggcgagaacttggtggttgatgaa
ttgaatttggctgacattggtccgaaatttgaacgtcatgcgctgttccctgcccgaact
aacacagaatttgtgcaagtgttctctcgctcacatctaaaaatgcgtgtttgggagcgt
ggtgctggagcaacgttggcttgtggaactggagcatgcgcggtagctgttgcagcaatc
ctcgagggtcgttctgagaggaactgtacggttgatttacctggagggccgttggtgata
gaatggagggaggacgacaaccatgtgtacatgacgggccctgctgaagtagtgttttat
ggatctgttcacctctag
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