Cynara cardunculus var. scolymus (artichoke): 112529176
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Entry
112529176 CDS
T05604
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112529176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112529176
03036 Chromosome and associated proteins [BR:
ccav03036
]
112529176
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
112529176
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
112529176
RSF complex
112529176
WICH complex
112529176
B-WICH complex
112529176
NORC complex
112529176
BRF complex
112529176
NuRF complex (fruit fly)
112529176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
DBINO
HDA2-3
Myb_DNA-binding
AAA_14
CHDII_SANT-like
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
112529176
NCBI-ProteinID:
XP_024996063
LinkDB
All DBs
Position
LG 16:6968995..6979171
Genome browser
AA seq
1070 aa
AA seq
DB search
MARRSKSKESTEESLSNSSEEEQVNDQEEEEDEEELEAVARPVDSDEDETATAAVEATGE
EQDEEEEYEDGNDESNNEISHREKARLKEMQRLKRQKIQDILDQQNASVEADMNNKGKGR
LKFLLQQTELFAHFAKSDQSASQKKVKGSGRHASKLTEEEEDEEYLKEEEDGLSGAGHTR
LLVQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGI
TGPHMVVAPKSTLGNWMNEIKRFCPILRAVKFLGNPDDRKYIREELLVAGKFDVCVTSFE
MAIKEKATLRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELW
ALLNFLLPEIFSSAETFDEWFQISGENDQEEVVQQLHKVLRPFLLRRLKSDVEKGLPPKK
ETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGP
PYTTGDHLVTNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRID
GNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQ
DRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQ
MVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTADLYD
FDDDKDENKFDFKKIVSDNWVEPPKRERKRNYSESEYFKQTMRQSGPARPKEPRIPRMPQ
LHDFQFFNTQRLSELYEKEVRYLMVQAQQKNQVKDSIEVDEPEEVGDPLTAEEQEEKEKL
LEEGFSTWSRRDFNTFIRACEKYGRSDVGSIVSEMEGKSEEEVERYARVFKERYKELNDY
DRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMIC
MVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEYDERER
QARKEKKLAKNMTPSKRAMARQATESPPSTIKKRKQSSMDDYVNSGKKGK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgatccaaatcgaaggaatcaacggaagagtctttgtctaattcttccgag
gaggaacaggtcaatgatcaggaagaagaagaagatgaggaggaacttgaagcggttgct
cggcctgttgattccgacgaagatgaaaccgccaccgccgcggttgaggctaccggtgag
gaacaggacgaagaggaagaatacgaggatggtaatgatgagtccaacaatgaaattagt
catcgtgaaaaggccagattaaaggaaatgcaaaggttgaagagacaaaagatacaagat
atactggatcagcaaaatgcttctgttgaggctgatatgaataacaagggaaaggggaga
ttgaagtttttactgcagcagacagaactgtttgctcattttgccaaaagtgaccaatct
gcttctcagaagaaggtgaagggaagtggtcgtcatgcatcaaagctcactgaagaagaa
gaggatgaggagtatctcaaggaagaagaagatggtctgtcaggagcaggacatacccga
ttgttggtgcagccctcttgtattcagggaaagatgagagattatcaacttgctggctta
aactggcttataagattatatgagaatggtataaatggaatccttgcagacgagatggga
cttggtaagaccttacaaaccatctccttgcttggttatttgcatgagtttagaggaata
actggtcctcacatggttgttgctccaaagtctactcttggcaactggatgaatgagata
aaacgcttttgcccaattttgcgtgctgtaaaatttcttgggaatccagatgataggaaa
tatatacgggaagagctacttgttgctggaaagtttgatgtgtgtgtcaccagttttgaa
atggccatcaaagagaaggctaccctacgccgctttagctggcgttatatcataattgat
gaagctcatcgaattaagaatgaaaattcactcctttcaaagaccatgaggatatacaat
accaactatcgtcttcttatcacaggcacaccacttcagaacaaccttcatgagctctgg
gcactgctgaactttttgctacctgagatttttagctctgctgaaacctttgatgagtgg
tttcaaatttctggtgaaaatgatcaggaggaggttgttcaacagcttcacaaggttcta
aggcccttcttacttcgaagattgaagtcagatgtggagaaaggtttacctcctaagaaa
gaaaccattctcaaggttggaatgtctcaaatgcagaagcaatattataaggctttactg
cagaaagatcttgaggtagtaaatgctggaggtgagcgaaagcgcctgttgaatattgct
atgcagctccgcaaatgctgcaatcatccatatctttttcaaggagctgaacctggtcct
ccttatactactggggatcatcttgtaacaaatgcaggcaaaatggtacttctagacaag
ttgctcccaaaattgaaggagcgtgattcaagggtcttaatattctcacagatgacaaga
ctgctggacattcttgaagattacttaatgtatcgtggatatttgtattgccgtattgat
ggaaatactggtggtgaagatcgtgatgcttcaattgatgccttcaataagccaggaagt
gaaaagtttgtgtttttgttatcaactagagctggaggccttggtatcaatcttgctact
gcagatatcgttattctttatgatagtgactggaatccacaagtggatttgcaagctcag
gatcgtgctcataggattgggcagaagaaagaggttcaagtgttccggttctgcactgag
tacactatagaggagaaggtcattgaaagggcttataaaaagcttgcacttgatgcttta
gttattcaacaaggacgcctagcggagcaaaaaacggtaaacaaagatgagctgctacag
atggtgagatttggtgctgaaatggtgttcagttcaaaggatagtacaatcacggacgaa
gatatcgatagaatcattgctaaaggagaggaggcaactgctgagcttgatgccaagatg
aaaaaatttacagaagatgcaataaagttcaaaatggatgacactgctgatttgtatgat
tttgatgacgataaggacgagaacaagtttgattttaagaagatcgtcagtgataactgg
gtcgagcctccaaaaagagagcggaagcgcaactactcggaatcagaatacttcaagcaa
acaatgcgtcaaagtggtccagcaaggccaaaggaacccaggattcctcgcatgccacaa
ttgcatgacttccagttcttcaacacacaaaggcttagtgagctgtatgagaaagaagtg
cgctatctcatggtgcaggcacaacagaagaatcaagtgaaagactcgatagaagttgat
gaaccagaagaggtgggagaccctttgactgctgaagagcaagaagaaaaagagaaacta
ctggaagaaggattctccacgtggagtaggagagacttcaatacattcataagggcctgt
gagaagtatggccggagtgatgtgggtagtattgtttctgaaatggaaggaaaatcggag
gaggaagttgaaagatatgcccgagtctttaaagaaagatacaaggaattgaatgattat
gatcgaatcatcaaaaacattgagagaggggaggctagaatttctcgtaaagatgaaata
atgaaagcaataggaaagaaattagaccgttacaagaatccttggctggagcttaaaatt
cagtatggtcagaacaaaggcaagctctacaatgaagaatgtgatcgattcatgatttgc
atggttcacaaacttggttatgggaactgggatgaactgaaggcagcatttcggacatca
cctttgttcagatttgactggtttgtcaagtctcgaactactcaggaacttgcaaggaga
tgtgatacactcattcgtttggtggagagggaaaatcaagaatatgacgagagggagaga
caggctcgtaaagagaagaaacttgctaagaacatgacaccatcgaagcgggccatggca
cgtcaagcaacagagagcccaccttctactataaagaagcggaagcaatcgtcaatggat
gactatgttaactcgggaaagaaaggcaaatga
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integrated database retrieval system
