Cynara cardunculus var. scolymus (artichoke): 112529234
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Entry
112529234 CDS
T05604
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00280
Valine, leucine and isoleucine degradation
ccav00650
Butanoate metabolism
ccav01100
Metabolic pathways
ccav04146
Peroxisome
Module
ccav_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
112529234
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112529234
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112529234
Enzymes [BR:
ccav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
112529234
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GFIT
Motif
Pfam:
HMGL-like
RdRP_3
Motif
Other DBs
NCBI-GeneID:
112529234
NCBI-ProteinID:
XP_024996172
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Position
LG 16:complement(14539930..14543901)
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AA seq
417 aa
AA seq
DB search
MSSLEEPLVLDKLPSLSTIHLSRRSSSKRCSTSGDQETGLGNCWIECGSSNSYEEELKEY
RQGAFSWRHHTRENDIVWESKGRNFEVHGNRCRSQHIANLQHSSYCNDARPRDITKKIFK
GMPKYVKIVEVGPRDGLQNEKNLVSTSVKIELIHRLLSAGLSVVEATSFVSPKWVPQLAD
AKEVVEAVKNLEAGRLPVLTPNLKGFEAAVAAGAKEIAVFASASESFSKANINCTIEQSL
ARYRDVIHASTKLSIPVRGYVSCVIGCPVEGSISPSKVAYVAKQLYDMGCCEISLGDTTG
IGTPGTVIPMLEAVMEVVPIEKLAVHFHDTYGQSLPNILVSLQMGISVVDASVAGLGGCP
YAKGASGNVATEDVVYMLNGLGIKTNVDLQKLLQTGDFICNYLGRPSGSKVAVASKI
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggaggagccccttgttttggacaaattgccaagcctaagcaccatccat
ctttctcgaaggtcctcatccaagcgttgcagcaccagcggagatcaggagaccggtttg
ggaaactgctggattgaatgtggatcatccaatagctatgaggaagagctaaaagaatac
aggcaaggagctttcagttggagacatcatacaagagagaatgatattgtgtgggaaagc
aaaggaaggaactttgaagtacatggaaaccgctgtcgttcacaacatatagcaaacctt
cagcatagctcctactgcaatgatgcacgcccaagggacataacaaagaagatttttaaa
ggcatgccgaagtatgtgaagatagtggaagttggtccaagggatggtttacagaatgag
aagaatttggtatctacttcagtgaagatagaattaattcataggcttctttctgctggt
ttatctgttgttgaggccacaagctttgtttcacctaaatgggtgcctcagctggcagat
gcaaaggaagttgttgaagcagttaaaaacttggaagctggaagattgcctgtattgaca
ccaaacttaaaaggttttgaagctgctgttgcagccggagcaaaggaaatagcggttttt
gcttcagcttctgagtctttttcaaaggcaaacattaattgcactatagaacaaagtctt
gcacgttaccgtgatgttattcatgcttcaacaaagctctcaatacctgttcgtgggtat
gtatcatgtgtgattgggtgcccagttgaaggttcaattagtccatcaaaagttgcatat
gttgcgaaacaactttacgacatgggttgttgtgaaatttcgcttggtgatacaaccgga
atcggtacaccaggaaccgtaattcctatgcttgaagcagtcatggaagttgtccccatt
gaaaagcttgcagttcactttcatgacacttatggccaatctcttcccaacatcttagta
tccctccaaatgggaataagtgtagttgatgcatcagtagcgggattaggaggatgcccg
tatgctaagggagcttcggggaatgttgccaccgaagatgtggtgtacatgcttaacggg
cttggtatcaaaaccaacgttgatctgcaaaagctcttgcaaacaggtgacttcatttgc
aattatttgggccgtccatcgggatcaaaggttgctgtcgcctctaaaatatga
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