Cynara cardunculus var. scolymus (artichoke): 112529269
Help
Entry
112529269 CDS
T05604
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112529269
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112529269
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112529269
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112529269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
NTP_transf_5
Motif
Other DBs
NCBI-GeneID:
112529269
NCBI-ProteinID:
XP_024996230
LinkDB
All DBs
Position
LG 16:complement(20369442..20376900)
Genome browser
AA seq
679 aa
AA seq
DB search
MAVKRGNSIAGVRRNNGGGGSWMSIVILVIFLVLAPVGFFVGCRITSTDQNDFSTTISKE
DVDWRAKLAFLHVKSLFSKEVIDVIKANTDDLGPWSLDSFRKNNLSASWKISGLENVIDD
NSSSTEITEANRKRITISKQEKILDAGHSQSVDTPAKLARRQLRDKRRENRAADLVKQDD
DVIIKLENAAIERSKSVDSAVLGKYSIWRKENDNENTDTTVRLVRDQMIMARVYKSIATM
KNKTELARELQNQLKESQRALGVATADADLNRSVPEKIKAMGKLLSKAKDQLYDCKMVTG
KLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPRSE
NLENPSLYHYALFSDNVLAASVVVNSTVMNAKEPEKHVFHLVSDKLNFGAMNMWFLLNPP
GKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKSDHQTTLSAGSSNLKYRNPKYL
SMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTGLWRVDLQGKVNGAVETCGESFHRFD
KYLNFSNPHIARNFDPNACGWAYGMNMFDLEEWTKKDITGIYHKWQNMNEERVLWKLGTL
PPGLMTFYGLTHPLDKSWHVLGLGYNPSIDKNEIEKAAVIHYNGNMKPWLELAMTKYRPY
WIKYIKFDHPYIRGCKLGQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaagagggggaattcaatcgcgggtgttcgcaggaacaatggaggaggtgga
tcttggatgtcaattgtgattcttgtgatatttctagttcttgctcctgttggcttcttc
gttgggtgtaggattacttcaactgatcaaaatgatttttcaactactattagcaaagag
gatgtagattggagagcaaagctggcttttttgcacgtcaaatctcttttctcgaaggag
gttattgatgtcatcaaggccaacacagatgatttaggaccttggagccttgattctttt
cggaaaaacaacttgtcagcttcttggaaaatttccgggctagaaaatgtgatcgatgat
aattcctcttctactgagattacggaagctaacagaaaacggatcacaataagcaaacag
gagaaaattttagatgcaggtcattctcaatctgtcgatacgcctgcaaaactagcaaga
aggcaactgagagataaaagacgtgaaaaccgagcagctgatttagtgaaacaagatgat
gatgtgatcataaagcttgaaaatgcagccattgaacgttcgaaatcagtcgactctgcc
gttcttgggaagtacagtatttggagaaaagagaacgataatgagaacactgatacaact
gtccgcttggttcgggatcaaatgatcatggcgagggtatataagagcattgcaacgatg
aaaaacaagaccgaattggcacgtgaactacaaaatcaacttaaagaaagtcaacgtgct
ttaggagttgccactgcagatgctgatcttaatcggagtgtaccggagaaaatcaaagct
atgggcaaactactgtcgaaagctaaagatcagctttacgattgcaagatggtcaccggg
aagctgagagctatgcttcaatcagccgacgagcaagttcgtagcttgaagaagcagagc
acgtttttgagccagttagcagccaaaacgatcccaaacggaatccattgcttatcgatg
cgcctaaccatagattattaccttcttccaccggagaagagaaagttcccgaggagtgag
aatcttgagaatccaagtctctatcactacgctctcttctcggataacgtcttggctgca
tcagttgttgtgaactcaactgtcatgaatgctaaggaaccagagaaacatgttttccat
ctcgtctccgataaattaaacttcggagcgatgaatatgtggtttttactgaacccgcct
ggtaaagctacgatccatgtggaaaatgttgacgaatttaagtggctgaattcatcgtac
tgtccagttcttcgacaactcgaatctgctgcaatgaaggaatactatttcaaatcggat
catcaaacgactctttctgctggttcatccaatttgaagtaccgaaacccgaagtatctt
tcaatgctgaatcaccttcggttttatctcccccaggtttatcccaagttgaacaaaatc
ctttttcttgatgatgatatcgttgttcagaaagacttaacggggttgtggagagttgat
ctccaagggaaagtgaacggcgccgttgaaacgtgtggagaaagctttcatcgttttgat
aagtacttaaatttctcgaatcctcatattgcaagaaactttgatcccaatgcttgcgga
tgggcttacgggatgaacatgtttgatctcgaggagtggacaaagaaggatataaccggc
atataccacaaatggcaaaatatgaatgaagagagggttctatggaagctaggaacttta
ccacccgggctgatgacattttatggtctaacacatccactcgacaaatcatggcacgta
ctcggtctcgggtacaatccaagcatcgataagaacgagatcgagaaagcggccgtgatt
cactacaacggaaacatgaagccgtggctcgagttggcaatgacaaagtaccggccgtat
tggatcaagtacataaagtttgaccatccttacatccgggggtgtaagctcggtcaatga
DBGET
integrated database retrieval system
