Cynara cardunculus var. scolymus (artichoke): 112529294
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Entry
112529294 CDS
T05604
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112529294
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112529294
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112529294
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112529294
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
112529294
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class I (G)
112529294
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112529294
Prokaryotic type
Other AARSs
112529294
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112529294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
112529294
NCBI-ProteinID:
XP_024996275
LinkDB
All DBs
Position
LG 16:16230970..16239556
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AA seq
643 aa
AA seq
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MFLIEKPFLSPRLHLLRPPPHPHPSSSTFPSRNYILKETSRRSFPVKWAHSTSTMAAATE
DNWSLKDQIAKVFEVSLKVTVPDEPEVAPLIAACAKKEFGDYQCNNAMSLWSKIKGKGTE
FRGPQPVGQAIMKNLPTSEMIESTSIAGPGFVNVKLSRQWMAKSIQKMLKDGIETWAPKL
PVKRAIVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLI
EFLFEKFPDGEVSDQAIGDLETFYKASKQRFDGDPEFKDRAQKAVVSLQGGEEKYRKAWA
QICEISRKGYGKVYEHLGVHLEEKGESFYNPYIPGTLDLLREKGLIEESEGAQVIFIEGK
KIPLIVVKRDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQREHFEMFFTAAKRAGWL
PTDESKYPKTNHVGFGLVLGDDGKRFRTRSSEVVKLVDLLDEAKTRCKAALVERGKAAEW
TAEELEHTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIR
KSGKDVEELKKEGQLILEKEEERKLGLHLLQFAEIVEDACTNLLPNILCEYLYDLSEKFT
SFYSECQVVGSAEETSRLLLCEATALVMRQCFHLLGITPVYKI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaatcgagaaaccttttctctctcctcgcctccatctcctccgcccccctcct
catcctcatccgtcgtcatctaccttcccatcccgtaattatattctgaaagaaacatct
agaagaagctttccagttaagtgggcacattccacatcaaccatggctgcagcaactgag
gataattggagccttaaagaccaaatagcaaaggtgtttgaggtctcacttaaagttact
gtccctgatgagccagaagtcgcgcctttaattgctgcctgtgctaaaaaagaatttggt
gattaccaatgcaacaatgccatgagcttatggtccaaaataaaaggcaagggtacagaa
tttagaggtccacaacctgttggacaggccatcatgaaaaatcttccaacatctgagatg
atagaatcaacatccatagctggtcctggctttgttaacgttaagttatcaaggcaatgg
atggcaaagagtatccaaaagatgctaaaagatggtatagagacatgggcaccaaaactt
cctgtcaaaagggcaatagtagatttttcatcacccaacatagcaaaagaaatgcatgtg
ggacatttacgatcgactatcattggagacacactagcacgtatgcttgagtattccaaa
gttgaagtgcttagaagaaatcatgttggggactggggtacgcagtttggaatgttgatc
gagttcttatttgaaaagttccctgatggggaggttagtgatcaagctattggagacctt
gagacgttctataaggcatcgaagcagagatttgatggtgaccctgagttcaaagataga
gcccagaaggcggtggtcagtctccagggcggcgaggaaaagtaccggaaggcatgggca
caaatctgtgagataagtcggaagggctacggaaaagtatatgagcatctgggagtccac
ttggaagaaaagggtgaaagcttttataatccctacattcctgggacacttgatctgctg
agggaaaagggattgattgaagaaagtgaaggagctcaggtgatctttattgaaggaaaa
aagataccccttatcgttgtgaagagagatggaggtttcaactatgcttcaacagatctt
gcagcgctgtggtatcgccttaatgaggaaaaagccgagtggataatatacgtcactgat
gtgggccagcgagaacactttgaaatgtttttcactgctgctaaacgtgcagggtggctt
ccgaccgatgagagcaaataccctaaaaccaatcatgttggatttggtcttgttctgggc
gacgatgggaagagattccgaacgcgtagtagtgaagtggtaaagttggttgatttgctt
gatgaagccaaaactcgttgtaaagcagcccttgtggagcgaggtaaggctgctgagtgg
actgctgaggagcttgagcatactgctgaagcagttggatatggtgctgttaagtatgct
gacctgaagaacaatagattgaccaattacacatttaattttgatcagatgcttaatgat
aagggaaatactgccgtctatctgctgtatgcacatgctcggatttgttcaattattcgg
aaatctggtaaagacgtagaggagctgaagaaggagggacaattaatattggaaaaagag
gaagaacgcaagctgggattacatttgctccaatttgccgagattgtcgaagatgcttgc
acaaatctattacccaatattttgtgcgaatacctatacgacctatctgagaagttcacc
agtttttactccgagtgccaggtggttggatctgctgaggagacaagcagattattgtta
tgtgaggcaactgcattggtaatgaggcaatgttttcatcttttggggatcactcctgtc
tacaaaatctga
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