Cynara cardunculus var. scolymus (artichoke): 112529318
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Entry
112529318 CDS
T05604
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112529318
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112529318
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112529318
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
112529318
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class II (A)
112529318
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112529318
Prokaryotic type
Other AARSs
112529318
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Rap1-DNA-bind
PGBA_C
TRM10_TRM10A
Motif
Other DBs
NCBI-GeneID:
112529318
NCBI-ProteinID:
XP_024996311
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All DBs
Position
LG 16
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AA seq
615 aa
AA seq
DB search
MADSANNVSIDDSTSASSEPEVVSKNARKKELKNKQKEEERRRKEEEKEKKAASMPKSAT
QKQSAADDEDMDPTQYFDNRLKALAAHKAAGMNPYPHKFHVSMSILEYIEKYESLNSGDH
LEDVQVSLAGRLMNKRSSSSKLFFYDLHGSGGKVQVMADARRSDLDEAEFSKYHSGVKRG
DIVGIVGFPGKSKRGELSIFPKSFTVLSHCLHMMPRQKSAAVADNANTKKVDVWTPGSGR
NPEAYILKDQETRYRQRYLDLMVNSEVRHIFKTRAKVVSYIRRFLDNLDFLEVETPMMNM
IAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLERVYEIGKQFRNEGIDLTHNP
EFTTCEFYMAFADYNDLMEITEKMLSGMVKELTGGYVIKYHANGLDNDPIQIDFTPPFRR
IDMIGELERMXNLSIPKDLAGDEANKYLAEACTKFDIKCPPPQTTARLLDKLVGHFLEET
CVNPAFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELANAYTELNDPVVQRQRFADQ
LKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMKP
QDEVPPVKGAEIVKS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcggctaataacgtctcaatcgatgactctacttctgcttcatcggaaccg
gaagttgtaagcaagaatgctcgcaagaaggagttgaagaacaaacagaaggaggaagag
aggcgtcgcaaggaagaggagaaggagaaaaaggctgccagcatgccaaaatcagcaact
cagaagcagtctgctgcagatgacgaggacatggatccaacgcaatattttgacaatcgg
ctgaaagcacttgcagctcataaggcagcaggaatgaatccctatcctcacaaatttcat
gtctcaatgtccattcttgaatatatagagaagtatgaaagcttaaatagtggggatcat
ctggaggatgttcaagtatctttggctgggcgactgatgaacaaacggtcttcttcatca
aagctattcttttatgatttgcatggttctggtggaaaagtgcaagttatggctgatgca
aggagatctgatttggatgaagctgaattctccaagtaccattctggtgtgaaacgtgga
gacattgttggtatcgtcggatttccaggaaaaagcaaaaggggagagctgagtattttt
ccaaaatcattcacagttttatcacactgtcttcatatgatgccaaggcaaaaaagtgca
gccgttgcggataatgccaatacaaagaaagttgacgtttggactccaggaagtggtaga
aatcctgaagcatatatattaaaagaccaggaaacacgataccgtcaacgttatttggat
ctgatggtaaactcggaagtcagacatatattcaagacccgagcaaaggtcgtctcttat
atcagacgttttcttgacaatcttgattttttggaggttgaaactcccatgatgaacatg
attgctggtggagcggctgcacgtccatttgtgacccaccataatgatctaaacatgaga
ttgttcatgcgcattgctcccgaactttatctgaaggagcttgttgttggtggactggag
cgtgtatatgagataggaaaacagttcagaaatgaggggattgatttgacacacaatcct
gaatttactacgtgcgaattttatatggcctttgcggactacaatgacctgatggagata
actgagaaaatgttgagcggcatggtgaaggagcttacaggtggctacgtaattaaatat
catgccaatgggttagataatgatcctatccagatcgacttcactcctcctttcagaagg
attgatatgattggggagttagagaggatgkcaaatcttagcatacccaaagaccttgcg
ggagatgaagccaataaatatcttgctgaagcatgcacaaagtttgatatcaaatgtccc
ccgcctcaaacaacagcacggttgctagacaaacttgtgggacactttttggaggagaca
tgtgtcaatcctgcttttataattaaccatcctgagataatgagtccgctggcaaagtgg
catcgatccaaaccaggcttgactgaacgctttgaattgtttatcaacaagcatgagctc
gccaatgcatacaccgaactcaatgatccagtggttcaacgccagcgatttgccgatcaa
ctaaaggatcgacaatcaggtgatgacgaagcaatggctttggatgagacgttttgtacg
gctcttgaatatggtttgccgccaactggtggttggggtttgggtattgacagacttgca
atgttgctgactgattcacagaacatcaaggaagttctacttttcccggccatgaaacct
caggacgaagtgccccctgtcaaaggtgcagaaatcgtgaaaagttaa
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