Cynara cardunculus var. scolymus (artichoke): 112529332
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Entry
112529332 CDS
T05604
Symbol
LOC112529332
Name
(RefSeq) asparagine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112529332 (LOC112529332)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112529332 (LOC112529332)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112529332 (LOC112529332)
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
112529332 (LOC112529332)
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class II (A)
112529332 (LOC112529332)
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112529332 (LOC112529332)
Prokaryotic type
112529332 (LOC112529332)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
112529332
NCBI-ProteinID:
XP_024996325
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All DBs
Position
LG_16:complement(562305..573263)
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AA seq
578 aa
AA seq
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MATAALSPATVSLRLKPFSSTIRFLSLYRNHQPNLTKLKYQIITTLPHHPPKHQLYFNHL
NDSITHRRCFSTIVSASVSSGEVVEKSKTESTDERVGEFRKRLRIVDIKGGESEGCDRLG
ETLTVRGWVRTLRVQSSVTFIEVNDGSCLSNMQCVIDSDAEGYDQVESGLIATGASICVH
GVVVPSQGKKQKIELKIHKLVTVGKSDTSFPIQKKKVTREFLRSKAHLRPRTNTFGAVAR
VRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTTLIPSSKEAIDSPADAIPR
TKNGLIDWSQDFFEKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWM
IEPELAFADLNDDMACATAYLQYVVKHVLENCKEDMDFFNNWIEKGIIDRLSDVVEKSFV
RLTYTDAVELLLKSKKKFEFPVKWGCDLQSEHERYITEEAFCGCPVIITDYPKDIKAFYM
RQNDDGKTVAAMDLLVPRVGELIGGSQREERLDYLENRLDELNLNKESFWWYLDLRRYGT
VPHAGFGLGFERLVQFATGLDNIRDTIPFPRAPGSAEF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgttgtcaccggccaccgtttctctccgcctgaaaccgttttcctcc
accattcgcttcctgtccttgtaccgcaatcaccaaccaaaccttaccaaactaaaatac
caaatcatcaccactcttcctcatcacccgccaaaacaccaactctacttcaatcacttg
aacgattccataactcaccgtcgatgcttttccaccatcgtatctgcctcagtatcctcc
ggcgaggtcgtagagaagtccaaaaccgaatctactgacgaacgagttggggaatttcgt
aaacggctgagaattgttgatataaaaggaggggaaagcgagggttgcgatagattaggt
gaaacgttgacggttaggggttgggttagaactcttcgtgttcagagcagtgttacattc
attgaggtgaatgatggttcatgcctgtcaaatatgcaatgcgtgatcgattcagatgct
gaaggttatgatcaggtggagagtggtttgatagcaacaggtgcatcaatctgcgtacat
ggagttgtggtaccgagccaaggaaagaaacaaaaaatagagctgaagattcacaaactt
gttacggttggtaagagtgacacatcatttcctattcagaagaaaaaggtcacacgagaa
tttttaagaagcaaggcacatcttcgtcctagaacaaacacttttggtgcggttgcacgg
gttaggaatgctttggcgtatgctacacataaattctttcaagaaaatgggtttgtttgg
atttcgagtcctattattaccgcatcggattgtgaaggtgctggcgagcaattttgtgta
accacattgataccaagctccaaagaagccattgattctccggccgatgctatcccaaga
acaaaaaacggcttaattgattggtcacaagatttttttgaaaaaccagcattcttgacg
gtctctggccaactcaacgccgaaacatacgctactgctctttctgatgtgtatacattt
ggtcctacatttcgagcggaaaattccaacacttccagacatttggctgaattctggatg
attgagcccgagcttgcatttgcggacctgaatgatgacatggcctgtgccactgcctat
ctccagtatgtcgtgaaacatgttcttgaaaattgcaaggaagatatggatttcttcaat
aattggattgagaaaggaatcatcgaccgtctgagtgatgtcgttgagaaaagctttgta
cgactgacttacacagatgcagttgaactacttctaaaatcaaagaagaaatttgagttt
ccggtgaaatggggatgtgatttgcaaagtgagcatgaacgttacataacggaggaagct
ttctgtggatgcccagttattataaccgactacccgaaggatatcaaagcgttctatatg
cggcaaaatgatgatggcaagactgttgcagctatggacttgctggttccacgggttggt
gagcttattggtggaagtcaaagggaagaacgtcttgattacttggaaaaccgtctagat
gaactcaacctcaataaggagagcttttggtggtacttggatcttcggcgttatggtaca
gttccacatgcgggtttcgggttgggtttcgagaggcttgtgcaatttgcaactggatta
gacaacattcgagatacaatacctttccctcgagcacctgggtctgccgaattttga
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