KEGG   Cynara cardunculus var. scolymus (artichoke): 112529389
Entry
112529389         CDS       T05604                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 7-like
  KO
K16253  DNA-directed RNA polymerase IV and V subunit 7
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112529389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccav03021]
    112529389
Transcription machinery [BR:ccav03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     112529389
SSDB
Motif
Pfam: S1 RNA_pol_Rbc25 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 112529389
NCBI-ProteinID: XP_024996424
LinkDB
Position
LG_16
AA seq 188 aa
MLCEVECLQHVAVPTKDVDTNGTVPTSSIVSSLLKQLKMCKALEEFGYFLGVTKLKNIGT
GRINNESLKYIDFLVAFNCRTLLPVKGEVMVGIVHSINRFGVFLKSGPMKIVYLSTRKMP
NYYYFVEEEGKPVFLSNDLSRIEKDVVIRFVVFATRWNQRTRDIRVLASIEGESLGPVTM
AGFDGFDI
NT seq 567 nt   +upstreamnt  +downstreamnt
atgttgtgtgaagtggaatgtctccaacatgtagcagttccgacaaaagacgtggacaca
aacggaacggttcccacaagttcgattgtgagcagtctcttaaaacagttgaaaatgtgc
aaagccttagaggagttcggttactttttaggagtaaccaagttaaaaaacattggtacc
ggaagaattaacaacgagtctttgaagtatatcgactttctggtagccttcaactgtcga
acccttttgcccgtcaagggtgaagtcatggtcggcatcgtgcactcgataaacagattc
ggggttttcttgaaatctggacccatgaagatcgtttatctatcgactcgaaagatgcca
aattattattactttgtggaagaggaaggaaaacctgtgtttctgagtaatgatttgtca
aggatcgagaaggatgtggtgatacggttcgtggtttttgcaacgagatggaaccagagg
actcgtgacattcgtgttctggctagtatcgaaggtgagtcgcttggaccggttactatg
gccggtttcgatgggttcgatatctag

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