Cynara cardunculus var. scolymus (artichoke): 112529472
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Entry
112529472 CDS
T05604
Name
(RefSeq) protein transport Sec1a
KO
K15292
syntaxin-binding protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112529472
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112529472
Membrane trafficking [BR:
ccav04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112529472
SNARE
SNARE associated proteins
Syntaxin-binding proteins
112529472
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112529472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
112529472
NCBI-ProteinID:
XP_024996537
LinkDB
All DBs
Position
LG 16:19857441..19873616
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AA seq
658 aa
AA seq
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MSCTDSDPSSHGGEYKNFRQISRDRLLHEMLKSSSSGDSRSSWKVLIMDKVTLKVMSASC
KMTDITDQGISLVEDLFKRRQPMPSMDVIYFIQPIKENIVMFLSDMSGREPLYRKAFIYF
SCSTPKELITHIKSDMSVVPRIGALREMNLEYFPIESQAFTTDHDRALQDLYSQAAENSR
QFDVCMNTMASRIATVFASLKEFPVVWYRSKGMDGSSAATLRDLVPVKLASAVWNCITMY
KTTIPNFPQTETCEFLIVDRSVDLIAPIIHEWTYDAMCHDLLDLEGNKYVQEVPSKSGGE
PQKKEFLLEDHDPVWLEMRHLHIAEASERLSDKMQNFMSKNKAAQLQQRDGNELSTREIQ
KMVQSLPAYNEQMEKLSLHVEIAGKINEIVRDEGLRDLGQLEQDLVFGDAGTKEVLHYLR
TYQGTDSEYKLRLVMIYAMVYPEKFEGDKATKLMQVAKLPPEDIKVIQNMKFLEGTKIRK
KHHGSFSLKFDSQKRHHALRKDKRGEEETWQLSRFYPILEDLLEKLSNHEMPKDEYQCMN
GPGPGPSSQSRSTQDASAKSGPTGNHPHSRRSRRTATWAKQNSSVGGNSSDSTVGHTTTD
FKNMGRRIFVFIVGGATRSELRVCHKLTAKLKREVVLGSTSIDDPPQYISKVKMLSGS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcaccgattctgatccgtcgtctcatggcggagagtataagaatttccgtcaa
atcagccgtgataggttgctgcatgaaatgctcaaatcatcctcatcaggggactcaaga
tcaagttggaaggtacttattatggataaagtcactctgaaagttatgtctgcttcatgc
aaaatgacggatatcacagatcaaggaatttcgttggtggaagaccttttcaagagaagg
cagcctatgccttctatggatgtcatatatttcattcaaccaattaaagagaacattgta
atgtttctatcggacatgtcgggaagagaacctttatataggaaagcatttatttatttt
agttgttctaccccaaaggagttgattactcatatcaagagcgatatgagtgttgtacca
cgcattggtgctctgagagagatgaacttggagtattttcctattgaaagtcaggcattt
acaactgatcatgacagagccttacaagacctgtacagccaagctgctgagaattctcgc
caatttgatgtttgcatgaacacaatggccagtcgcattgctactgtttttgcttcattg
aaggagtttcctgttgtatggtaccgttcaaagggcatggatggatcttctgcagcaaca
ttacgtgatttggtgcctgtaaaacttgcttctgctgtttggaactgcattacaatgtat
aagactacaattcctaactttccgcagactgaaacatgtgagtttctcattgtggataga
tctgttgatctgattgcacccatcattcatgaatggacttatgatgcaatgtgccatgat
ttgttagacttggagggaaacaaatatgtgcaggaggtccccagtaaatctggtggcgag
cctcagaaaaaggagttccttttggaagatcatgatccagtttggcttgaaatgcgtcat
ttacatatagcagaagccagtgaaagattgagcgacaagatgcaaaattttatgtcaaaa
aataaagctgcacaattacagcaaagagatggtaatgagttatctactagggagatacag
aaaatggttcaatctttgcctgcatacaatgaacaaatggagaaactctcactccatgta
gagattgctggaaaaatcaacgaaattgtcagagatgaagggctcagagatcttggtcaa
ctcgagcaggatcttgtctttggtgatgctgggacaaaggaagtcctccactatttaagg
acttatcagggcacagatagtgaatacaaattgagattggtgatgatttatgcaatggtt
taccctgaaaagtttgagggtgacaaagcaacaaagcttatgcaggtggcaaaattgcct
cctgaggatataaaggtaatacaaaatatgaaatttctggagggaacaaaaatcagaaag
aaacatcatggaagcttctcccttaagtttgattctcaaaagaggcatcatgcattaaga
aaggataaaagaggagaagaggaaacatggcaactctcccgattttatcccatcttagag
gatttgcttgaaaaacttagcaaccacgagatgccaaaggatgagtaccaatgcatgaac
ggtccaggtccaggtccaagtagtcaaagtcggagcacacaggatgcatcagcaaagagt
ggccccacaggtaaccatccacattcaaggagatcaaggaggacagccacatgggcaaag
caaaattcatctgttggtggaaattcaagtgattccacagttggtcatacaactacggac
tttaaaaacatggggcggcgtatttttgtattcatcgtcggcggggcaaccagatctgag
ttacgggtttgtcacaagcttaccgctaaattaaagagggaggtggtactaggttcaact
agtatcgatgatccaccgcaatacatttcaaaagtgaagatgctttctgggagttga
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