Cynara cardunculus var. scolymus (artichoke): 112529474
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Entry
112529474 CDS
T05604
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112529474
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112529474
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
Pep3_Vps18
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
112529474
NCBI-ProteinID:
XP_024996540
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Position
LG_16
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AA seq
591 aa
AA seq
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MGVGGNFWDLLKPYARTEGFDFLRNKRVAIDLSYWIVQHETAIKAHTRNPHLRLTFFRTI
NLFSKFGAFPVFVADGTPSPLKSQARIMRFLQASGIDLTSVQLADGTSVERNRKFLNCVQ
ECVELLELFGMPVLRASGEAEGLCAQLNREGRVDACITSDSDAFLFGAKCIIKRLKPNSQ
EPFECYQMSDVEGGLGLKRNHLIAIALLVGNDHDLKGVQGIGIETALSFVKLFGEDEVLD
RLRELGSGNTLTMTYVDDSSHNSDVNTTRMRVSHCSLCGHPGSKRSHLKDSCECCSSSTI
KGCTQKPIGFTCDCSSCDMDKKEKEQTKKEAWKTRVCKKIAAEPNFPNDAIIQMYLSNNH
SSFTDAEPFISWKNPSTEMLVDYVAYKLNWEPSFIRQKLFPLLSTVFLRNITKNQETDLL
FGQYEFDFIQRTKMRFGHTFYVVIWKKSAKTVDNRIYEAHAEEEAEVEEDLDEVDHVVDI
FDEPDVTNVRVDNGCLTTDENRDLVMAAYPEKVDQFMQEKESKEMKSRKKSRAKSPSTTP
VNSSSPTSRRLQLNITQFFRSSKGESTENSKDNGSSSGNLSKSARRRLLLE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttggggggaatttttgggatttacttaaaccctatgctcgaacagaagggttt
gattttctgagaaacaaaagggtcgccattgatctatcgtattggattgttcagcatgaa
accgccattaaggctcacactcgaaaccctcatctcagactcactttcttccgtaccatc
aatctgttctccaagtttggtgcttttccggtgtttgtggcagatggaaccccatcgcca
ttgaagtctcaagcaaggatcatgcggtttttgcaagcatctggaattgatcttacaagc
gtgcagctggcggatggaacttctgtcgaaagaaatagaaagttcttaaattgcgttcaa
gaatgcgtggagttacttgaactttttggaatgccggttttgagagcgagtggagaggcc
gaaggactttgtgcacaattaaatagggaaggtcgtgttgacgcttgtattacctctgat
agtgatgcgttcctctttggcgccaaatgtattattaagcgcctcaagcccaactctcag
gaaccatttgagtgctatcaaatgtcggatgtggaaggtggcttaggactaaagagaaat
cacttgatagccattgcacttttggtcggaaatgaccatgatttgaaaggtgtacaaggg
attgggatcgagacggcgctttcttttgtgaaattgttcggtgaagatgaggttttagat
aggctacgtgaattaggaagcggaaatacgcttactatgacttatgtggatgactcttcc
cataactcagatgtaaacacaacgagaatgagggtttctcattgttcattatgcggacat
ccgggaagcaagagatctcatctaaaagattcttgtgaatgttgcagttcaagtacgatc
aaaggttgcacacagaaaccaatcgggtttacatgcgattgttcctcatgtgatatggat
aagaaagaaaaggagcaaacgaagaaagaagcttggaaaacgagagtttgcaaaaaaatt
gctgcggagccgaacttcccgaatgacgcaatcattcagatgtatttgagcaacaaccac
agcagtttcaccgatgccgaaccgtttatatcgtggaaaaatccgagtacggaaatgtta
gttgattacgtagcttataaactgaactgggaaccctcgtttatccggcaaaaactcttt
ccgcttttgtccaccgttttcttgagaaatataaccaaaaatcaagaaaccgatttgttg
tttggacaatacgagtttgatttcattcagagaacgaagatgaggttcggtcatacgttc
tacgtggttatttggaaaaaatctgcaaaaacagttgacaatcgtatctatgaggcgcat
gcggaagaggaggccgaagttgaagaagatcttgacgaagtggaccacgtggtggatatc
ttcgatgaaccggatgtcaccaacgttcgtgttgataacgggtgcttaacgactgatgaa
aatagggatcttgttatggctgcgtaccccgaaaaggttgatcaatttatgcaagagaag
gagtcgaaggaaatgaaatcgaggaaaaaatctagagcgaaatctccgtcgaccacaccc
gtgaattcatcatcgccgacatcaagaagacttcaactcaatattacacaatttttccgt
tcatctaaaggagagtcgaccgaaaactcaaaagacaacggttcttcttcaggaaatcta
tcgaaatctgctaggcgtcgccttctacttgaataa
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