Cynara cardunculus var. scolymus (artichoke): 112529731
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Entry
112529731 CDS
T05604
Name
(RefSeq) TBC1 domain family member 22B-like
KO
K20360
TBC1 domain family member 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112529731
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112529731
Retrieval pathways
112529731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Yuri_gagarin
Get2_like
Motif
Other DBs
NCBI-GeneID:
112529731
NCBI-ProteinID:
XP_024996874
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All DBs
Position
LG 16:12487985..12499708
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AA seq
460 aa
AA seq
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MVVTKKKPMKNTNSNLKDQDPKQGTTAIDNHLTTLDSRFNQTLLNVQGMLKGRSFPGKVL
ITRSDPMDATILHSPGIDRSPSTGSNKYEDGTNEDQVHRSKPDASTTANQLNSSMINPVN
TSLEAPRFVMSTRATDTAKLMKFTKVLGGVTVILDKLRELAWSGVPPYLRPNVWRLLLGY
APPNSDRREGGLRRKRIEYFDCVAQYYDISDNERTDEEINMLRQIAVDCPRTVPDVNFFQ
QVQVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSEHLEGNVDSWSIADLDPDK
ISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPISRHMEEQGLDFL
QFSFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSEKLQKLDFQE
MVMFLQHLPTQNWGDQELEMVLSRAFMWHTMFDSCPNHLV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggttgttaccaaaaagaaacccatgaagaataccaacagtaatttgaaagatcaagat
ccgaagcaaggtaccaccgccattgataaccatctcacaacacttgattcaagatttaat
caaactctcctcaatgtacaagggatgttaaagggtcgcagcttccctggtaaagtgctg
ataacaagatcagatccaatggatgctacaattttacactctcctggtattgatcgtagt
ccctctactggctcaaataaatacgaggatggtacaaatgaggatcaagttcacagaagt
aaaccagatgctagtaccactgcaaatcagttaaattcttcaatgataaatcctgtgaat
acatctttggaggctccgaggtttgtgatgagcaccagagctacggacactgctaagctg
atgaagttcacgaaagtgttggggggagtaactgtcattttagacaagttgcgtgagtta
gcttggagtggtgtgccaccttatctgcgccctaatgtttggaggcttcttttgggatat
gcaccccctaattcagatcgaagggagggaggcctaagaagaaagcgcatagagtatttt
gattgtgttgctcagtattacgacatttcagataatgaacgtactgatgaggagattaat
atgcttagacagattgctgttgattgtcctagaaccgtgcctgatgttaattttttccaa
caagtccaagtccagaaatccttggagcgaatactatatacatgggcaatccggcatccg
gcaagtggatacgtccagggaataaatgatcttgctacaccctttttagtagttttcttg
tcagaacatttagaagggaacgttgatagttggtcaattgctgatttagatcctgataag
atctccaatgttgaagctgattgttattggtgtctatccaagttacttgatggtatgcaa
gaccattatacgtttgctcaacccgggatccaacggctagtatttaaactcaaggaattg
gtgagacgaattgatgaacctatttctaggcatatggaagagcaagggcttgattttctt
caattttcttttcgatggttcaattgtcttcttatacgagagattcctttccatctggtc
acccgtttatgggacacatatcttgctgaaggtgatgcattgccagatttccttgtgtat
atatttgccagttttcttttaacgtggtcggaaaagctccaaaagttggatttccaggag
atggtgatgttccttcaacacctcccgacacagaactggggtgaccaagagctggaaatg
gtcctttcgagggcgtttatgtggcacaccatgttcgacagttgtcccaatcacttggta
taa
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