Cynara cardunculus var. scolymus (artichoke): 112529800
Help
Entry
112529800 CDS
T05604
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112529800
Spliceosome [BR:
ccav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112529800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
DUF6270
Motif
Other DBs
NCBI-GeneID:
112529800
NCBI-ProteinID:
XP_024996974
LinkDB
All DBs
Position
LG 16:complement(18496723..18501503)
Genome browser
AA seq
375 aa
AA seq
DB search
MATANPFDLLGDDDNDDPSQLVQKIVAAPIKKVQAAAPAGKTAAQPAKPSAKLPSKPLPP
AQAVKEARNEGGRGGRGGGRGYGRGRGGGGFNRDSTNNEGSFGNRGFSGGQGGIEESDAA
KLSERRGGYGGSRGGFRGGRHVSFGNGDAEDGEHPRRPYERRSGTGRGNEFKREGAGRGN
WGTQADDIKQEIDEGVTEGEKTVATDKPSAEEEATDGKKENSANERVEEPENKEMTLEEY
QKVLEEKRKALAALKTEERKVEVDKELASMQQLSNKKSSDDIFVKLGSDKDKRKEIAERE
ERAKKSLSINEFLKPAEGERYYTPGGRGRGRGPRGGGGGGGGGGRFNQGGGGSSSYAPEA
PKIEDPSHFPTLGGK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcgaacccttttgatttgcttggagatgatgacaacgatgacccatcacag
cttgtgcagaagatcgttgctgcgccgatcaagaaagttcaagccgctgctcctgccggt
aaaacggccgctcagccggctaagccttcggctaagcttccctctaagcctcttcctcca
gctcaggccgtgaaagaagctcgaaatgaaggtgggcgtggaggacgtggtggtggtcgt
gggtatgggcgtggccgtggtggaggaggatttaatagagattctaccaacaatgagggt
tcatttggtaaccgtggattctctggtggtcaaggtggtattgaagagtctgatgctgct
aaattgtcggagagacgtggtggttatggtggttctcgtggggggttccgtggtgggcgc
catgtttctttcggtaatggagatgctgaggatggagaacatcctcgtcggccttatgaa
cgccgtagtgggacggggcgtgggaatgagttcaaacgtgagggagccggtcgtgggaac
tggggaactcaggctgatgacatcaaacaggagattgatgaaggggtgaccgaaggagaa
aaaactgtggctactgataagcccagtgctgaggaggaggcaacagatgggaaaaaggag
aattctgcaaatgaacgcgtggaggagcctgagaataaggagatgacacttgaagagtat
caaaaagttctggaggagaagaggaaagctctggcggcactcaagactgaggaaagaaag
gtggaagtcgacaaagagctcgcatccatgcagcagctctccaacaagaaaagcagcgat
gacatcttcgtcaaattgggttctgataaagataagcgcaaagagattgctgagcgagaa
gagagagctaaaaagtcactgagcatcaatgagttcttgaaacctgctgagggagaacga
tattacaccccaggtggtcgtggccgtggccgtggccctagaggaggtggaggtggaggt
ggaggtggcggccgttttaaccaaggcggtggtggttcatcaagctatgcaccggaagct
cccaaaatcgaagatcccagccacttccctactttaggtggtaagtga
DBGET
integrated database retrieval system
