Cynara cardunculus var. scolymus (artichoke): 112529830
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Entry
112529830 CDS
T05604
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112529830
Spliceosome [BR:
ccav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112529830
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Pox_A8
Motif
Other DBs
NCBI-GeneID:
112529830
NCBI-ProteinID:
XP_024997008
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Position
LG 16:complement(130255..133907)
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AA seq
358 aa
AA seq
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MASTNPFDLLGDDDNDDPSQLIAKLPVAVATAKKSPVAKPAAKLPSKPLPPSQAVREAKT
DGQRGGGRFGGNGTGRGGRGGRGFNRDSVDNENSYGNNNGFSGGYNRPLENGDGEKPSER
RGPRLGNRGGRRGGYSNGDGAEGERPRRVFERRSGTGRGSEFKREGAGRGNWGTATDEVP
TETEEPVTETEKIMESDKQAGQEDVGDANKENTVEVAEEKEPEEKEMTLEEYEKVLEEKR
KALVGLKNEERKVSLDKDLAKMQLLSNKKTEEDIFVKLGSEKDKRKEAADKEEKAKKSVS
IDEFLKPAEGERYNNGGGRGGRGRGRGFRGGYGGGNIMHNVVAPSIEDVGQFPSLSVK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacgaatccttttgatcttttgggtgatgatgataacgatgacccttctcag
ctcatagcaaagcttccggtggctgttgcaaccgctaagaaatctccggttgctaagccg
gcagccaagcttccttccaaaccgcttcctccttctcaggctgtgcgagaggcaaagact
gatggtcaacgtggaggagggcgatttggtggaaatggaacagggagaggtggtcgtggt
ggacgtggttttaatcgtgattcagttgataatgagaattcatatggaaataacaatggg
ttttccggagggtacaacagacctttggaaaatggagacggtgagaaaccatctgaaaga
cgtggaccccgtttgggaaaccgtggtggccggcgaggtggctacagtaatggagatggc
gctgaaggtgaacgccctaggagggtgtttgaacgccgcagtgggactggtcgtggaagc
gagtttaagcgtgaaggtgcaggtcgtggcaactggggaacagccaccgatgaggttccc
acggagactgaagaacctgttactgaaaccgaaaagattatggagtctgataaacaagca
ggacaagaagatgttggtgatgccaacaaggagaatactgtagaggtggcagaggagaaa
gagcccgaggagaaggaaatgaccctggaggagtatgagaaagtgcttgaagagaagagg
aaagcattggtaggactgaagaatgaggaaagaaaggtgagcttagacaaagatttggca
aaaatgcagctgctttccaacaaaaagactgaagaagacatctttgttaaactgggttct
gagaaggacaagcgtaaagaagctgctgacaaagaagaaaaggcaaagaagtctgtaagc
atcgacgagtttctgaagcctgccgagggagaaaggtacaataacggtggaggacgtggt
ggtaggggccgtgggcgtgggtttagaggaggatatggaggtgggaacataatgcacaat
gtggttgcaccgtctattgaggatgtcggtcagttcccatcgttgagtgtcaagtga
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