Cynara cardunculus var. scolymus (artichoke): 112529857
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Entry
112529857 CDS
T05604
Name
(RefSeq) actin-related protein 9
KO
K11673
actin-related protein 8
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112529857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112529857
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
112529857
INO80 complex (yeast)
112529857
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Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
112529857
NCBI-ProteinID:
XP_024997050
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Position
LG 16:16895285..16911112
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AA seq
595 aa
AA seq
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MDFSKSVIPAHLLGDRGSNLVVINPGSANVRIGLAQQDAPFSIPHCIARHTTGANQSPKR
NVQDQNLNSQVTTAQHVEREKAYDIIASLLKIPFLDEEVVNNSYPRKMGRVDVLSQQNSK
KESMLAWTDVFQKSSSSSLASESPSHKHETSESPDLQEGGSTEKPQTSESKYREYICGEE
AMRISPTEPYCLRRPIRRGHLNISQHYSTQQVLEDLQAIWDWILVEKLHIPHSERNMYSA
LIVVPETFDNREIKEILSIVLRDLRFSSAVVHQEGLAAVFGNGLSTACVVNIGAQVTSVI
CVEDGVALPHTQITLRFGGEDVSRCLLWTQRHHQTWPPIRTDALAKPIDLLMLNRLKESY
CQIYEGEVEAVGVVHSYEDGLPPGSHKTRLTALNVAPMGLFYPTLLVPDVYPPPPRSWFK
DYEDMLEDTWHIDFPRRTDISDGLYPGISNPLQMWDNYSYPSNQQKKEDNIGLAEAITKS
ILSTGRIDLQRKLFCSMQLIGGVALTTGLISAMEERVLHAIPSNEAIDTVEVLQSRTNPS
FVAWRGGAILGVIDYGRDAWIHREDWIQNGIHIAGGRKYKDSYYLQAQPMCYINS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggacttctccaaatcagtaatccctgcacacctcctcggcgaccgtggttctaatctt
gtcgtcatcaatccagggtctgcaaatgtgcgaattggattagctcaacaggatgctccc
ttcagtattcctcattgcattgcccggcataccacaggagctaatcaatcacccaaaaga
aatgtgcaagatcagaaccttaattctcaagttacaacagctcaacatgtggagagggag
aaagcctatgacattattgcatccttattgaagataccattccttgacgaagaggtggta
aacaactcttacccacgaaagatgggccgtgttgatgtattatctcaacagaatagtaag
aaagagagtatgctcgcatggactgatgtgttccagaaaagttcgagttcatccttagca
tcagaaagtccatcacataagcatgaaacaagtgagtcaccagacctgcaggaaggtggg
agtactgagaagccacagacaagtgaatccaagtacagagagtacatatgtggtgaagaa
gctatgcgaatctctccaactgaaccgtattgcttaagacgtccaatacgcagaggccat
cttaatatttctcaacattattccacgcagcaggtgctagaagacttgcaagccatctgg
gactggatattggttgagaaactacatattcctcacagtgagagaaacatgtattctgca
cttattgtagtgcctgaaacatttgataatcgagaaattaaggaaatattatctattgtc
ttacgagatttgcggttcagctcagcagtagtccaccaggaaggtcttgctgcagtcttt
ggaaatggattatcaacagcatgtgtcgtgaatattggtgctcaggtcacttcagttatt
tgtgtcgaggatggagttgctcttcctcatacacagatcaccttacgttttggcggagag
gatgtatcaagatgccttctgtggactcagagacatcatcagacatggccacctattcgc
acagatgctcttgcaaagccgatagatttgctgatgctcaacagactcaaagaatcttac
tgccagatttatgaaggagaggttgaagctgttggggtggttcattcatatgaagatggc
ttgccacctggatctcataagacgaggctaactgccctaaatgtagcgcctatgggtctt
ttctatccaacacttttggttccagatgtctatcctcctccacctcgttcatggttcaaa
gattatgaggatatgctagaagatacttggcatatagactttcccaggagaactgacata
tcagatgggttatatccaggcatcagcaatccactacagatgtgggacaactattcttat
ccttcaaaccaacagaagaaagaagacaacattggccttgcagaagccattacaaagagt
atcctgtcaacagggcgtatagatctacaaagaaagttgttttgtagcatgcaactgatt
ggtggagtcgctttgacaactggtcttatttctgccatggaggagagagttttacatgcg
attccctcaaacgaagcaatcgatactgttgaggtactgcaatcaagaaccaatccttcg
tttgtggcatggcggggtggagccatactgggcgtaatcgattatggtcgagatgcttgg
atacatcgagaagactggattcaaaacgggattcatattgcggggggcagaaaatacaag
gattcttattatctccaagcacaaccaatgtgttacataaattcctag
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