KEGG   Corynebacterium canis: CCANI_03885
Entry
CCANI_03885       CDS       T09233                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ccaw  Corynebacterium canis
Brite
KEGG Orthology (KO) [BR:ccaw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccaw03400]
    CCANI_03885
Enzymes [BR:ccaw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CCANI_03885
    5.6.2.6  RNA 3'-5' helicase
     CCANI_03885
DNA repair and recombination proteins [BR:ccaw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CCANI_03885
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C WH2_Lhr ResIII DUF6406 HTH_IclR AAA_25 PhoH
Other DBs
NCBI-ProteinID: WJY74629
LinkDB
Position
859402..863889
AA seq 1495 aa
MSESVLGRFRPQVAAWFRDVFSAPTAVQTQAWERISDGDNALVVAPTGSGKTLAAFLWAL
NSLAAPPEQSALFDAPMPPRRRHVKVLYISPLKALGVDVEQNLRAPLTGISVTARRLGLP
VPEIRVGVRSGDTPAAERARLQRNPPDILITTPESLYLMLTSKAAATLSEVHTVIVDEIH
ALAGTKRGSHLALSLERLSMMTEFQRIGLSATVRPLERVAEFLGPGTVIVAPPAEKRWDL
HVHVGEEDMSDLSNREQGSTIGELVLDSELPEFASESALPVANSMWPSIERDVYQQVMSA
RSTLLFVNSRRTAERLTSRLNELWALEHDPESLAYQGRRDPAQIMSSGDIAGRAPQVIAR
AHHGSVSKEDRARTERMLKAGELRCVVATSSLELGIDMGAVELVIQVESPPSVAAGLQRV
GRAGHAVGATSIGRLYPLHRADLVQTAVVVDRMRAGMIEELSVPKNPLDVLAQQTVAAVA
MADLDIDDWFETVRRAYPYRDLPREAFDAVIDLVSGSYPSTEFAELRPRVDFDRISGQLT
ARPGAQRLAVTNGGTIPDRGMFGVFLVGGEEGARRVGELDEEMVHETRVADVFTLGASSW
RVEEITRDQVLVTPAPGHTGRLPFWKGDQTGRPAELGKAVGAFRRDPRLSDDLDANAANN
IRKFLADQLEATGIIPDEKTLVIERFRDELGDWRVILHSPYGRGVNAAWALAVGAQFDFD
AQVVAGDDGMILRIPDCDIEPGAELFQIDPAEIEDIVAREVGGSALFAARFRECAARALL
MPLQRPGQRAPLWQQRQRASQLLEVARKYPSFPVILETVRECMQDVYDLPALVQLLSDIA
ARRVRITEVTVDQPSPFAASLLFHYAGAFMYEGDAPSAEKRAAALALDPALMAKLLGKVE
LRELLDADVVVAVERDIRRYGRARNPIELEDSLRILGPIPIADLDWYCTYPEPEGSLTHR
MMSVRIAGIEHIALSQDAPLLRDGLGVPVPVGVAASPEVVTDALEQLLGRWARTHLPFTV
AEIAAAFGLPIGTAHSALRGLDLLAGHYTSSDEQLCDSRVLRILRSRSLAAARAAVSPVS
PEAFARFFLDWHRVAPVGKRPELHGIDGVYSVIEQLSGVRLPASAWESIVLPSRVADYNP
AWLDELTTHGEVILRGAGKAGSRDPWVVLLPAEDAAQITAVSQPEPTLGMVDQQVFDYLS
QGGGYLFSDIRAHVRATPNEVRDAMWNLVEAGLIAPDGFQPVRAHLGSGGRVAHRASRRP
SRTRAPIPPDAVGRWSATEVPAANATERGKAYGDIWLNRYGVVTRGSIVSEDVIGGFALA
YKVLSGFEERGKALRGYLIDGLGASQFSTPAVVDRLRSFEDNAPAEPKLYVLAAADPANP
YGAALPWPVPNLSRAAGARVILVDGRLVGYLTRGGKNLTLIAETELAHIAEALSHTGDTV
AKINSENVLTSPYLPEFQALGARISPQGMRMPARNIRPAERKTRGRRLSDIRFDD
NT seq 4488 nt   +upstreamnt  +downstreamnt
atgtctgaatctgtgttggggcggttccgtccgcaggtggcggcgtggttccgcgatgtc
ttttccgcgcccaccgccgtccaaacgcaggcatgggaacgcatcagcgatggtgataac
gcgctggtggtggccccgacgggttccggcaagacgttggcggcgtttttgtgggcattg
aattcgctcgccgctccacccgagcagagcgcgcttttcgacgccccgatgcccccgcga
cgtcgtcacgtaaaggtgctctatatctcaccgttgaaggcgctgggggtggatgtggag
cagaatctgcgggcgccgctgacgggcatttcggtgacggcgcggcggctgggtttgccg
gtgccggagattcgggtcggggtgcggtccggcgataccccggcggcggagcgggcgcgg
ctgcaacggaacccaccggacattttgatcaccacgccggagtcgctgtatctgatgctt
acttcgaaagcagctgcgacgctgagcgaagtgcatacggtgatcgtggatgagatccac
gcgttggccggaacgaagcgcggctctcaccttgcattgagcctcgaacgtttatccatg
atgacggaatttcagcgcatcggcctgtccgccaccgtgcggcccctggaacgcgtggcg
gaattcctgggtccgggtacggtgatcgtggcgccgcccgcggaaaaacgctgggatttg
catgttcacgtgggggaagaggatatgtcggacctttccaatagggagcaggggtccacg
atcggggaattggtcttggattcggagttgcccgagtttgccagcgaatctgccttgccg
gtggccaattccatgtggccttccatcgaacgtgatgtctatcagcaggtcatgtcggcg
cgttcgactttgctgtttgtaaattcgcggcggaccgcggagcggctaacctcccggctg
aacgagctgtgggcattagaacacgatcccgaatctttggcgtatcaggggcggcgggat
ccggcccagatcatgtcttccggggacatcgcggggcgggcgccgcaggtgatcgcgcgg
gcgcatcacggctcggtaagcaaggaggatcgggcgcgtaccgagcgcatgctcaaggcg
ggggaattgcgctgtgtggtggccacctcatcgctcgaactggggatcgatatgggtgcc
gtggagctggtgatccaggtggaatccccgccgagcgtggcggccgggttgcagcgcgtg
ggccgcgcagggcacgccgtgggcgcgacgtcgataggtaggttgtatccgttgcaccgc
gctgacctggtgcaaactgccgtggtggtggatcggatgcgcgccgggatgatcgaggag
ctttcggtgcccaaaaacccgctcgacgtgctggcgcagcaaaccgtggcggcggtggcg
atggccgacctggatatcgacgattggttcgaaaccgtgcggcgcgcgtatccgtaccgc
gacctgccccgcgaggcattcgacgctgtgatcgatttggtgagcggcagctatcccagc
accgaattcgcagagctcagaccccgcgtggatttcgatcgaatctctggtcaattaacg
gctcggccgggggcgcagcgcctggcggtgaccaatggcggcaccatcccggatcgcggc
atgttcggggtgttcctcgtcggcggcgaggagggggcgcgcagggtcggggagctcgat
gaggaaatggtgcacgagacccgcgtcgccgatgtgtttacccttggcgcatcgagttgg
agggtggaggaaatcacccgcgaccaggtattagtcacgcctgcgccggggcatacgggc
aggttgccgttctggaaaggcgaccagaccggtcgccccgcggagcttgggaaggcggtg
ggtgcgtttcgccgcgacccccgattgagcgatgatctcgatgccaacgccgccaataat
atccgcaaattcttggcggatcagctggaagccacgggcattattcccgatgaaaagacc
ctagtaatcgaacgtttccgcgacgagcttggggattggcgggtgatcctgcattccccc
tatgggcgcggcgtcaatgcggcgtgggcgcttgcggtaggcgctcagttcgatttcgac
gcgcaggtcgtggcgggcgatgatggcatgatcctgcgcatcccggattgcgatattgag
ccgggggcggaactctttcagatcgatcccgccgagatcgaagatattgtcgcccgtgag
gtcggtggctccgcattgttcgcggcccggttccgggaatgcgccgcccgcgccttattg
atgccgctgcaacgccccggccagcgggcgccattgtggcaacagcggcagcgcgcttcc
caattgctggaggtggcccgcaaatacccgagcttccccgtgatattagaaaccgtgcgc
gaatgcatgcaggatgtgtacgacctgcccgcgctggtgcaattgctttcggatatcgcc
gcccgccgggtccgcatcacggaagtcaccgtggatcagccgagcccgttcgcggcctcc
ttattgttccattacgcgggcgcatttatgtacgaaggcgacgctccctcggcggaaaag
cgggccgccgcattggccctggacccagcgctgatggcgaagctgctgggcaaagtggag
ctccgggagctcctagatgccgatgtggtggtggccgtggagcgcgatattcgccgctac
gggcgcgcccgcaacccaatagaactcgaggattccctgcgtatcctcgggccgataccc
atcgcggacctggattggtattgcacgtatccggaaccggaaggcagcctgacgcatcgc
atgatgtcggtgcgcatcgcgggcattgaacacatcgccttatcccaagacgccccgcta
ttgcgcgatggtttgggggtgcccgtgccggttggggtggctgcgtctccggaggtggtc
accgatgcattagaacaattgctcgggcgttgggcgcgcacgcatctgccgtttaccgtc
gcggagatcgccgccgcattcggattgcccatcggcaccgcgcacagcgccttgcggggc
ttggatctgctggctggccactacacttcatcggatgaacagctgtgcgattcgcgggta
ttgcggatattgcgcagccgaagccttgccgccgctcgcgcggccgtttcgccggtatcc
ccggaggcctttgcgcgtttctttctggattggcatcgggtcgcacctgtgggcaaaagg
cccgaattgcacgggatcgatggcgtgtattcggtcatcgaacagctttccggggtgcgg
cttcccgccagcgcctgggagtccatcgttttgccctcccgcgtggccgattacaacccg
gcttggctggatgaattgaccacccacggggaagtcatcctgcgcggcgcgggcaaggcc
ggctcgcgcgatccgtgggtggtgttgctgcctgcggaagacgcggcgcagataaccgcc
gtgtcgcagccggagcccacgcttggcatggtcgaccaacaagtgttcgattatctaagc
cagggaggcggttacctatttagcgatattcgagcgcacgttcgtgcaacgcccaacgag
gtgcgggacgcgatgtggaacctcgtcgaggcgggacttatcgcgcccgatggttttcag
cccgtgcgcgcgcatcttggctccggcggacgcgtggctcaccgcgcttctcggcggccg
tcgcggacccgcgcgccgatcccgccggacgcggtggggcgatggtcagcgaccgaggtg
ccagcggcgaatgcgacggagcgcggcaaagcctatggcgatatttggctgaatcgctac
ggcgtggtcacccgcggaagcatcgtcagcgaggacgttattggcgggtttgccttggca
tataaggtattgagcggtttcgaggaacgcggcaaggcgctgcgcggatacctgatcgat
gggctcggcgcctcccaattttccacccccgcggtggtcgatcggctgcgcagttttgag
gataatgcgcccgccgagccgaagttgtatgtgctcgcggccgccgatccggccaatccg
tacggtgcggctttgccgtggccggtgccgaatctgagccgtgctgcgggtgcgcgggtg
atcttggtcgacggtcggcttgtgggctacctcactcggggcggcaaaaacctgacgctg
atcgccgaaaccgagctcgcacatattgccgaagccttaagccataccggggataccgta
gccaagattaatagcgaaaacgttctaacctcgccgtacctgccggagtttcaggccttg
ggggcgcggatcagtccgcagggcatgcgcatgcctgcccgcaatatacgccctgcggaa
cgtaaaacccgcggccgacggctgtccgatatccgcttcgacgattga

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