Corynebacterium canis: CCANI_03940
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Entry
CCANI_03940 CDS
T09233
Symbol
uvrD3
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccaw
Corynebacterium canis
Pathway
ccaw03420
Nucleotide excision repair
ccaw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCANI_03940 (uvrD3)
03430 Mismatch repair
CCANI_03940 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaw03400
]
CCANI_03940 (uvrD3)
Enzymes [BR:
ccaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCANI_03940 (uvrD3)
DNA repair and recombination proteins [BR:
ccaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCANI_03940 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
CCANI_03940 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
WJY74640
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All DBs
Position
875533..877857
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AA seq
774 aa
AA seq
DB search
MAGLNPQQRAAVEHIGAPLLIVAGAGSGKTAVLTRRIAYLLGCRGVHPGQILAITFTNKA
AAEMRDRVADLVGPVAERMWVSTFHSTCVRILRQQAKLVPGLNTNFTIYDADDSKRLLSG
IVKDLDLDARKFTARGLAAAISACKNELISPADSMAQATQTRNPWELTVAKVYKVYQQRL
RAANAVDFDDLIGEVVGVFTRHPDVAEYYRRRFRHVLVDEYQDTNHAQYMLLASLVGTAD
QGKQVPPSELCVVGDADQSIYAFRGATIRNIEEFERDYPQARTIVLEQNYRSTQTILSAA
NAVIAQNQNRREKKLWTALGEGEPVIGYVADNEHDEAQFVASEIDSLVDQGRSFSDFAVM
YRTNNSSRALEDVFIRTGIPYKVVGGTRFYERKEIRDIVAYLRALENPDDSVSLQRIINT
PRRGIGDRALAAVNLHAQQQGISFGQSLLDAAAGNVELLAPRSSKAIARFVEMMDGLRDT
IVEHTDQDTGLTDIGAVVAAVLDVTEYRAGLENSNDPQDGARLDNLNELVSVAREFSSEA
TNRLAYEEGSEAAPAGLQAFLERVSLVADADQLPEEGQGVVTLMTLHTAKGLEFPVVFLT
GWEDGQFPHQRALGEPQELAEERRLAYVGITRARQRLYLTRALIRSSWGDSTANPASRFL
QEIPEHLVQWRREEPQFPGYDTGGDTDWPPLEWGAPAFRQPKPRAQKSRLPKAASRTGGS
LVLNVGDRVNHEKYGLGSVIESHPGSPAATVTIDFGSAGTVRLMLIGNLPMEKL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtggccggcctgaacccccagcagcgggcggcggtggagcacattggcgcaccgttgttg
attgtggcgggcgcgggctccggcaagacggcggtgttgacgcgccgtatagcgtatctg
cttggctgccgcggcgtgcacccgggccagattttggctattacctttactaataaggcg
gcggcggagatgcgcgatcgcgtggcggaccttgtggggcccgtcgcggagcgcatgtgg
gtgtccacgtttcattccacgtgtgtgcggattttgcggcagcaggcgaagctggtcccc
ggcctcaacacgaatttcactatttatgatgcggacgattcgaagcgcctgctttccggc
atcgtcaaggacctggatttggacgcccggaagttcacggcgcgtgggctcgcggcggcg
atttccgcttgcaagaacgagttgatttcgccagcggattcgatggcgcaggcgacgcag
acgcggaacccgtgggagttgaccgtcgccaaggtatataaggtgtaccagcaacggttg
cgcgcggccaacgccgtggatttcgacgatttgatcggggaagtggtcggcgtattcacg
cggcacccggacgtcgcggaatattatcgacgccgcttccgccacgttctcgtcgacgaa
taccaggacacgaaccacgcccaatatatgttattggcgtcgctcgtgggcaccgctgac
caggggaaacaggttccgccgagcgagttgtgcgtggtgggtgatgccgatcaatctatc
tatgcgttccgcggcgcaaccatccgcaatatcgaggaattcgaacgtgattacccacag
gcgcgcaccattgtattagaacagaattaccgttccacgcagacgattttgtcggcggcg
aatgcggtgattgcgcaaaaccagaaccggcgcgagaagaagttgtggacggcgctgggg
gagggcgaaccggtaattggttatgttgcggacaacgagcacgatgaggcgcaatttgtc
gcctccgagattgattcgctggtggaccaggggcgttcctttagcgatttcgcggtgatg
taccgcaccaataattcttcccgcgcgctcgaggacgtgttcattcgaacgggcattccc
tacaaagtggtgggtggcactcgcttctatgagcggaaggagatccgcgatatcgtcgcc
tacctgcgcgcattagaaaacccggacgattcggtatcgcttcagcgcattattaatacg
ccccgccgcggcatcggcgatcgcgcgcttgccgccgtaaacctgcacgcgcagcagcaa
ggcattagttttggtcagtcgcttctcgacgccgcggccggcaacgtggagctcttggcc
ccgcgcagcagcaaggcaatcgcacgctttgtcgagatgatggatgggttgcgggacact
atcgtcgagcacacggaccaagacacgggcctcaccgatatcggggcggtggtcgcggcc
gtgctggacgtcaccgaataccgcgcgggcctagagaattcaaacgacccgcaggacggc
gcccgcctggataaccttaacgagttggtgtccgtggcccgtgagttctcctcagaggcg
acgaaccgcctcgcctatgaggaaggtagcgaagctgctcccgccgggctccaggccttt
ctggagcgcgtttcgctggtggctgacgcggaccagctacctgaggaagggcagggcgtg
gtcacgctgatgacgctgcacaccgcgaagggcttggaattccccgtggtattcctgacg
ggctgggaggacggccaattcccgcaccagcgcgcactgggcgaaccgcaggaactcgcg
gaggaacgccgcctcgcgtatgttggcatcacgcgcgcccgccaacgcttgtaccttacg
cgcgccttaatccgcagctcctggggcgattccacggccaaccccgcatcgcgctttctc
caggaaatccctgagcacctggtgcaatggcggcgtgaggaacctcaattcccaggctac
gacaccggcggcgacaccgactggccgccgctggagtggggcgcgcccgcgttccgacag
ccgaaaccgcgtgcgcagaaatcccggctgcccaaagcggcgagccgcaccggcggcagc
ctcgtgctcaacgtgggcgaccgcgtcaaccacgaaaaatacgggctcggctccgtgatc
gaatcccacccgggcagcccggcggccacggtgaccatcgatttcggctctgcgggaact
gttcggctgatgctcatcggcaatttacccatggaaaagctctaa
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