Corynebacterium canis: CCANI_08600
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Entry
CCANI_08600 CDS
T09233
Name
(GenBank) Putative ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ccaw
Corynebacterium canis
Pathway
ccaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCANI_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaw03019
]
CCANI_08600
Messenger RNA biogenesis [BR:
ccaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CCANI_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WJY75548
LinkDB
All DBs
Position
complement(1903247..1905235)
Genome browser
AA seq
662 aa
AA seq
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MTEPRNRPRKVVRKAGPPEAVEFQAPAGDAEAKTTVQDIPSGDENRANGRNQTGRNRRGG
RGRRDNGGGGGRRNVVKSMQGADLTQRLPQPPKSPKDGLRIVALGGISEIGRNMTVFEYH
NRLLIVDCGVLFPSSGEPGVDLILPDFSYLEDKLNRIEALVVTHGHEDHIGAIPWLLKLR
PDIPIIASKFTLALISAKCGEHRQRPKLVPVDENSNEKRGPFDIRFFAVNHSIPDCLGVA
ISTGAGLVVHTGDIKLDQTPTDKRPTDLPALSRLGDEGVALFLCDSTNATTPGVSGSEAE
IGPTLKRLVADAKQRVIVASFASNVYRVQAAVDAAVAAGRRVAFNGRSMLRNMEIAEKMG
YLKAPRGTIITMDEAAKLAPHKVMLVTTGTQGEPMAALSRMARREHRQINVRDGDLIILS
SSLVPGNEEAVFGVINMLAQIGATVVTGRDAKVHTSGHGYAGELLFLYNAVRPKNVMPVH
GEWRHLRANKELAISTGVDRDQVVLAQNGVVVDLIDGRARVVGQVPVGNLYVDGVTMGDI
DEEVLADRTSMGEGGLITVTVVIDNRTGRPLERPTVQAKGFSEDAAAMMPEVTELVANLM
LDLAGEGENDPYRMVQQLRRKVSRYVEQKWRRKPMIIPTVVPMHAEATHIDDEDIRGSRE
SL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccccgtaaccgtccgcggaaggttgtgcgcaaagcaggcccgccggaggca
gtagagttccaagccccggccggcgatgctgaggccaaaaccaccgtgcaggatatccct
tccggtgacgaaaatcgggcaaatggaagaaaccagacgggccgcaaccgccggggcggg
cgcggtcggcgcgataacggcggtgggggcgggcgtcgtaacgtggtgaaatccatgcag
ggtgcggacctgacgcagcggttaccgcaacccccgaaatcccccaaagacgggctgcgc
attgttgcgcttggcggcatttccgaaatcggccgcaacatgactgtgttcgaataccac
aaccgcctgctgatcgtggactgcggtgtgctattcccgtcctccggcgaacccggcgtg
gacctgatcctgccggacttctcctatttggaggacaaacttaatcgcatcgaggcgctg
gtggtcacgcacggccacgaggaccatatcggcgcgatcccgtggctgctgaagctgcgc
ccggatatcccgattattgcttcgaagttcacgctggcgctgatttccgcgaaatgcggc
gagcatcggcagcgccccaagctcgtgcccgtggacgaaaattcgaacgaaaagcgcggg
ccgtttgatatccgcttcttcgcggtgaaccactccatcccggattgcctgggcgtggcc
atttccacgggcgccgggctggtcgtacataccggcgatatcaagctggatcagacgccc
acggataagcgccccacggacctgcccgcattgtcgcggctgggcgatgagggcgtggcg
ctgttcctgtgcgattccacgaacgccaccacccccggcgtgtccggttcggaggcggag
atcgggcccacgctcaaacgtttggttgcggatgcgaagcagcgcgtgatcgtggcctcc
ttcgcctcgaacgtatatcgggttcaggcggctgtcgacgccgcggtggccgccggccgc
agggtcgcgttcaacggccgttccatgctccgcaatatggagatcgcggagaagatgggg
tatctgaaggccccgcgcggcacgatcatcaccatggatgaggcggcgaaactcgccccg
cataaggtgatgctggtgaccacgggtacgcagggcgagccgatggccgcgttgtcccgc
atggcccgccgcgagcaccggcagatcaatgtgcgcgacggcgatttgatcattttgagc
tcgtcgctggtgccgggcaatgaggaggccgtgttcggtgtgatcaatatgctggcgcag
atcggcgccacggtggtcacgggccgcgacgccaaggtgcacacctccggccacggctat
gccggcgaactgttgttcctgtataacgccgtccgcccgaagaacgtgatgccggtgcac
ggcgagtggcgtcacctgcgcgcgaacaaggaattggccatttccaccggcgttgaccgg
gaccaggtggtgctcgcacaaaacggcgttgtggttgaccttatcgacggccgcgcgcgc
gtcgttgggcaggtccctgtaggtaacctgtacgtcgacggcgtcaccatgggtgatatc
gacgaagaggtgttggcggaccgcacctccatgggcgagggcggcctgatcaccgtgacc
gtggtgattgataaccgcactggccgcccgctggagcgcccgacggtgcaggcgaagggc
ttcagcgaggacgccgcggcgatgatgccggaggtgaccgaactggtggccaatctgatg
ctggatctggcgggcgagggcgaaaacgacccgtaccgcatggtgcagcaattgcgccgc
aaggtgtcccgctatgtggagcaaaagtggcgccgcaagcccatgattatccccaccgtg
gtgcccatgcatgcggaggctacgcacatcgatgatgaggatattcggggatcccgcgag
agcctataa
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