Cupriavidus cauae: KZ686_01035
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Entry
KZ686_01035 CDS
T08639
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ccax
Cupriavidus cauae
Brite
KEGG Orthology (KO) [BR:
ccax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccax03016
]
KZ686_01035
Enzymes [BR:
ccax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KZ686_01035
Transfer RNA biogenesis [BR:
ccax03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KZ686_01035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
UZN49302
LinkDB
All DBs
Position
1:complement(228210..230420)
Genome browser
AA seq
736 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLNQQGEAYQVELPAGKRTKVKSRDVLLQFAQPSAAELLSQTAAL
TGEIDLDFLWECAPEQEFGFTELAAEYYGAAASPAQQAALAMALHGNPVYFRRKGRGRYQ
RAPEDQLKAALAGLERKRQQALVQAEYEQQLKAGVLPEAFRGKVLTLLFKPDKNSLEYKA
LDAACTALGKSPMRLMIEVGGVPNARALHEARFLSECFPKGTGFPEITVPEPGGDLPLAP
VEAFSIDDVTTTEIDDALSVMPLDEGRLRIGIHIAAPGLGIRRGDPLDAIARQRLSTVYF
PGDKITMLPDAVVERYTLQEGRQCPALSLYVTYDPAAQQILASETRAEMVSIAANLRHNL
LDEVVTEAALTEGSGDYPFREALTALWGFANFLYDERQRARVASGLRPESHSRADYSFYL
DEQPDGSQRVRIEQRKRGSPLDKIVAELMILANSTWGKLLADHGVPGIYRTQKAWGMHRT
RMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQIIAAAQHGVTAKLVAPFKPKDADLL
AAVADFEGTYAAYAEHQSTMERYWCLRWLAQENRERMMATVLKDGAVRFAEIPLVTRVPE
LAQAARGTQVLLEIAGTDELTLEVSCRVLEVFAGEGELPAEELEGDEESAEVSAEAAAEV
AAEQAAEEAAEQGAETVPETLEGTGTEAPAEAIPGERANDNANANANANANASAGDGADG
RDGAARTAGNGGPAAS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgttgttcgaggaaggcggcgagatccgcgccggtaccgtgctgaatcagcaa
ggcgaggcctatcaggtcgaattgcccgcgggcaagcgcaccaaggtcaagtcgcgcgac
gtgctgctgcagttcgcgcagccgagcgcggccgagctgctgtcgcagacggcggcgctg
accggcgagatcgatctcgatttcctgtgggaatgcgctcccgaacaggagttcggcttc
accgagctggccgccgagtactacggcgcggccgccagccccgcgcaacaggcggcgctg
gcgatggcgctgcacggcaatccggtctatttccgccgcaagggccgcggccgctaccag
cgcgcgcccgaggaccagctgaaggcagcgctggccgggctcgagcgcaagcgccagcag
gcgctggtgcaggcggaatacgaacagcaactgaaggccggcgtgctgcccgaggcgttc
cgcggcaaggtgctgacgctgctgttcaagccggacaagaacagcctcgagtacaaggcg
ctcgatgccgcgtgcaccgcgctgggcaagtcgccgatgcggctgatgatcgaggtcggc
ggcgtgccgaacgcgcgcgcgctgcacgaggcccgcttcctgtccgagtgcttccccaag
ggcaccggctttccggagatcacggtgccggagccgggcggcgacctcccgctcgcgccg
gtcgaggcgttctcgatcgacgacgtcaccaccaccgagatcgacgacgcgctgtcggtg
atgccgctggacgaggggcgcctgcgcatcggcatccatatcgcggccccgggtctgggc
atccgccgcggcgatccgctcgacgcgatcgcgcggcagcggctgtcgacggtctacttt
ccgggcgacaagatcacgatgctgccggacgcggtggtcgagcgctacacgctgcaggaa
gggcgacagtgcccggcgctgtcgctgtacgtgacctacgatccggccgcgcagcagatc
ctcgccagcgagacgcgcgccgagatggttagcattgcggccaatctgcgccacaacctg
ctcgacgaggtggtgaccgaggccgcgctgaccgaaggcagcggcgactatccgttccgc
gaggcgctgaccgcgctgtggggcttcgccaatttcctgtacgacgagcgccagcgcgcg
cgcgtcgccagcggcctgcggccggagtcgcacagccgcgccgactacagcttctatctg
gacgagcagcccgacggcagccagcgcgtgcgcatcgagcagcgcaagcgcggatcgccg
ctggacaagatcgtcgccgagctgatgatcctggccaacagcacctggggcaagctgctg
gccgaccacggcgtgccgggcatctaccgcacgcagaaggcctggggcatgcatcggacc
cgcatgcaaacctatccggctccgcacgaggggctgggcgtcgcgcagtatgcgtggagc
acctcgccgctgcgccgctatgtcgatctggtcaaccagtggcagatcatcgcggccgcg
cagcacggcgtcaccgccaagctggtggcgccgttcaagcccaaggacgccgacctgctg
gccgcggtggcggacttcgagggcacctatgccgcctatgccgagcaccagtcgaccatg
gagcgttactggtgcctgcgctggctcgcgcaggagaaccgcgaacgcatgatggcgacc
gtgctgaaggacggcgcggtgcgctttgccgagatcccgctggtcacgcgcgtgcccgaa
ctcgcgcaggccgcgcgcggcacgcaggtgctgctcgagatcgccggcaccgacgagctg
acgctggaagtcagctgtcgggtgctggaggtgtttgccggcgagggtgagctgccggcc
gaagaactggaaggcgatgaagaatcggcggaggtctccgccgaagcggccgccgaggtg
gcggccgagcaggccgcggaagaggccgccgagcagggcgccgagacggtgccggagaca
ttggagggtaccggtaccgaagcgccggccgaagccatccccggcgaaagggccaacgac
aacgccaacgccaacgccaacgccaacgccaacgccagcgccggcgacggcgccgatggt
cgcgacggcgctgccaggaccgccggcaacggcggccccgctgcctcctga
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