Cupriavidus cauae: KZ686_02435
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Entry
KZ686_02435 CDS
T08639
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccax
Cupriavidus cauae
Pathway
ccax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KZ686_02435 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccax03021
]
KZ686_02435 (rpoC)
03400 DNA repair and recombination proteins [BR:
ccax03400
]
KZ686_02435 (rpoC)
Enzymes [BR:
ccax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KZ686_02435 (rpoC)
Transcription machinery [BR:
ccax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KZ686_02435 (rpoC)
DNA repair and recombination proteins [BR:
ccax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KZ686_02435 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
UZN49533
LinkDB
All DBs
Position
1:complement(529296..533546)
Genome browser
AA seq
1416 aa
AA seq
DB search
MKALLDLFKQVQQEEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVLEPGMTPLKKSQIMSEDDYIAKCEEYGEGEFVAM
MGAEGIRELLRGIDIEKQIEQIRAELQATGSEAKIKKYAKRLKVLEAFQRSGIKPEWMIL
EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML
QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP
TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME
ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGKGEGMTFADVSEVIRAYEN
KEVELASRVNVRITEYELVDKDAEGDARFAPKITLQATTVGRAILSEILPKGLPFSVLNK
PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPQKEKII
ADAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQHEDVVDRNGNTV
KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI
STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEEDCGTTNGVAMKALVEGGEVIEA
LRDRILGRVTVSDVVNPETQETAIEAGTLLDEDLVDLIDQIGVDEVKVRTPLSCDTRYGL
CAKCYGRDLGRGTLVNTGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKA
TGTVRFTATMRYVTNAKGELIVISRSGEALITDDHGRERERHKIPYGATLLVQDGQAIKA
GTQLATWDALTRPIVSEYSGTIKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTAATKG
LRPQVKLLDANGQEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD
ITGGLPRVAELFEARSPKDAAVLAEVTGTVSFGKDTKGKQRLVITDLDGNAHEFLIAKEK
QVLVHDGQVVNKGEMIVEGPADPHDILRLKGIEELAHYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIVDVGDTKFIPGEQVERSELLDENDRVIAEGKRPATYENLLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKTDDLRGLKENVIVGRLIPAGTGLAYHRARKAREA
AERERAQAISEEEQSLFMEPSEVHATTENGGDTPAV
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgatctctttaagcaggttcagcaggaagagcagttcgacgcgatc
aagatcgggctggcctcgcccgagaagatccgctcgtggtcgtacggcgaagtcaagaag
ccggagaccatcaactaccggacgttcaagcccgagcgcgacggtctgttctgcgccaag
atcttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtcgaagtgacgctggcgaaggtgcgccgcgag
cgcatgggccatatcgaactggccgcgccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtat
ttcgaagcgttcgtggtgctcgagcccggcatgactccgctcaagaagagccagatcatg
tccgaggacgactacatcgcgaagtgcgaggagtacggcgagggcgaattcgtggcgatg
atgggtgccgagggcatccgtgaactgctgcgcggcatcgacatcgagaagcagatcgaa
cagatccgcgccgagctgcaggccaccggttccgaagccaagatcaagaagtacgccaag
cgcctgaaggtgctcgaggccttccagcgttcgggcatcaagcccgagtggatgatcctc
gaagtgctgccggtgctgccgcccgagctgcgtccgctggtgccgctggacggcggccgc
ttcgcgacctcggacctgaacgacctgtatcgccgcgtgatcaaccgcaacaaccggttg
aagcgcctgctcgagctgaaggcccctgaaatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcggtcgactcgctgctggacaacggccgtcgcggcaaggcgatgaccggcgcc
aacaagcgtccgctgaagtcgctggccgagatgatcaagggcaagggcggtcgtttccgt
cagaacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccg
acgctgaagctgcaccagtgcggcctgcccaagttgatggcgctggagctgttcaagccc
ttcatcttccacaagctggaaacgatgggcatcgccaccaccatcaaggcggccaagaag
gaagtcgaaagccagaccccggtcgtgtgggacatcctcgaagaggtgatccgcgagcac
ccggtgatgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggccttcgaaccg
gtgctgatcgaaggcaaggcgatccagctgcatccgctcgtctgcgcggcgttcaacgcc
gacttcgacggtgaccagatggccgtccacgtgccgctgtcgctggaagcgcagatggaa
gcccgcacgctgatgctggcctccaacaacgtgctgttcccggccaacggcgatccgtcg
atcgtgccgtcgcaggacgtggtgctgggcctgtactacaccacccgcgacaagatcaac
ggcaagggcgagggcatgaccttcgccgacgtcagcgaggtgatccgcgcctacgagaac
aaggaagtcgaactggcttcgcgcgtgaacgtgcgcatcaccgagtatgagctggtcgac
aaggacgccgagggcgacgcgcgcttcgcgccgaagatcacgctgcaggccaccacggtc
ggccgcgcgatcctgtccgagatcctgccgaagggcctgcctttctcggtgctgaacaag
ccgctgaagaagaaggaaatctcgcgcctgatcaacaccgcgttccgcaagtgcggtctg
cgcgagacggtgatcttcgccgacaagctgctgcagtcgggcttccgcctggccacgcgc
gccggtatctcgatcgcgatcgacgacatgctggtgccgccgcagaaggaaaagatcatc
gccgacgccgcggccaaggtgaaggaatacgacaagcagtacatgtcgggtctggtgacg
gaccaggagcgctacaacaacgtcgtggacatctggggcgccgccggcgaccaggtcggc
aaggcgatgatggagcagctgcagcacgaggacgtggtcgaccgcaacggcaacaccgtc
aagcaggagtcgttcaactccatctacatgatggccgactcgggcgcacggggttccgcg
gcgcagatccgtcagctggccggcatgcgtggcctgatggccaagccggacggctcgatc
atcgagacgccgattaccgcgaacttccgcgaaggcctgaacgttctgcagtacttcatc
tcgacccacggtgcacgtaagggcctggccgataccgcgctgaagacggcgaactcgggt
tacctgacccgtcgtctggtcgacgtgacgcaggatctggtggtggtcgaggaggattgc
ggcaccaccaacggcgtcgcgatgaaggcgctggtggaaggcggtgaagtcatcgaagcg
ctgcgcgaccgtatcctgggccgcgtgacggtgtcggacgtggtcaaccccgagacgcag
gaaaccgcgatcgaggccggcacgctgctggacgaagacctggtcgacctgatcgaccag
atcggcgtggacgaggtcaaggtccgcaccccgctgtcgtgcgacacgcgctatggcctg
tgcgccaagtgctatggccgcgatctgggccgcggcacgctggtcaacaccggcgaagcg
gtcggcgtgatcgccgcgcagtcgatcggcgagccgggcacgcagctgacgatgcggacg
ttccacatcggcggtgcggcatcgcgtgcggcggtcgcctcgagcgtcgaagcgaaggcc
accggtacggtgcgcttcaccgcgacgatgcgctacgtgaccaacgccaagggcgaactg
atcgtgatctcgcgttcgggcgaggcgctgatcaccgacgaccacggccgcgagcgcgag
cgccacaagatcccgtacggcgccacgctgctggtgcaggacggtcaggcgatcaaggcg
ggcacgcaactggcgacctgggacgcgctgacgcgcccgatcgtgtcggagtactcgggc
acgatcaagttcgagaacgtcgaagaaggcgtgaccgtcgccaagcagatggacgaggtt
accggtctgtcgacgctggtcgtgatcgacgccaagcgccgtacggctgccaccaagggc
ctgcgcccgcaggtgaagctgctcgatgccaacggccaggaagtcaagattccgggcacg
gaccactccgtgaccatcggcttccaggtcggcgcgctgatcaccgtcaaggacggccag
caggtgcacgtcggtgaagtgctggcgcgtatcccgaccgagtcgcagaagacccgtgac
attaccggtggtctgccgcgcgtggccgagctgttcgaagcgcgttcgccgaaggacgcc
gccgtgctggcggaagtcaccggtaccgtgtcgttcggcaaggacaccaagggcaagcag
cgtctggtcattaccgacctcgacggcaatgcgcacgagttcctgatcgccaaggaaaag
caggtgctggtccacgacggtcaggtggtgaacaagggcgagatgatcgtcgagggtccg
gcggatccgcacgacatcctgcgcctgaagggcatcgaggagctggcgcactacatcgtc
gacgaggtgcaggacgtctatcgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgatcgtgcgtcagatgctgcgccgtgtgcagatcgtcgatgtcggcgacaccaagttc
atcccgggtgaacaggtggagcgctcggagctgttggacgagaacgaccgcgtgatcgcg
gaaggcaagcgtccggcaacctacgagaacctgctgctcggtatcaccaaggcgtcgctg
tcgaccgacagcttcatctcggcggcatcgttccaggaaacgacgcgcgtgctgaccgaa
gccgcgatcatgggcaagaccgacgacctgcgtggtctgaaggaaaacgtgatcgtgggt
cgcctgatcccggccggtacgggcctggcctaccaccgcgcccgcaaggcgcgcgaggcg
gccgagcgcgaacgcgcgcaggcgatctccgaagaagagcagtcgctcttcatggagccg
tcggaggtgcatgccaccaccgagaacggcggcgatacgccggcggtctga
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integrated database retrieval system
