Cupriavidus cauae: KZ686_05600
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Entry
KZ686_05600 CDS
T08639
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ccax
Cupriavidus cauae
Brite
KEGG Orthology (KO) [BR:
ccax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccax03021
]
KZ686_05600 (rpoH)
Transcription machinery [BR:
ccax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KZ686_05600 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
DUF733
Sigma54_CBD
RovC_DNA-bd
HTH_26
Motif
Other DBs
NCBI-ProteinID:
UZN50067
LinkDB
All DBs
Position
1:complement(1246569..1247498)
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AA seq
309 aa
AA seq
DB search
MNAVLSADSITMNNTLPMVPQRANSMALTLPAGLGNLDSYIQAVHRIPMLTAEEEQRLAR
ELRDHDSVEAARRLVMSHLRLVVSIARQYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGV
RLVSYAIHWIKAEIHEYVLRNWRMVKVATTKAQRKLFFNLRSHKQSAHTFTPDEIDAVAR
ELNVKPEEVMEMETRLSGGDLALEGQVDDGEEEFAPIAYLADNHNEPTRVLEAKRQDRMQ
VEGLEQALTKLDPRSRRIIEARWLQVNDDGSGGATLHELADEFGVSAERIRQIESAAMKK
MKGALQAFA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcagtcctgtctgccgattcgatcaccatgaacaacaccctgccgatggtgccc
cagcgcgccaacagcatggccctgaccctgcccgccgggctgggcaatctcgacagctat
atccaggctgtccaccgtattccgatgctcaccgccgaggaggagcagcggctcgcgcgc
gagctgcgcgaccacgactcggtcgaggccgcccgccggctggtgatgtcgcacctgcgc
ctggtcgtatcgatcgcgcgccagtacctgggctacggcctgccgcacgcggacctgatc
caggaaggcaatatcggcctgatgaaggccgtcaagcgcttcgacccggaccagggcgtg
cgcctggtgtcgtacgcgatccactggatcaaggcggagatccacgagtacgtgctgcgc
aactggcgcatggtcaaggtcgcgacgaccaaggcccagcgcaagctgttcttcaacctg
cgcagccacaagcaaagcgcccataccttcacgccggacgagatcgacgcggtcgcgcgc
gagctgaacgtcaagccggaagaagtgatggagatggaaacccgtctgtcgggcggcgat
ctggcgctggaaggccaggtcgacgacggcgaggaggagttcgctccgatcgcctacctg
gccgacaaccacaacgagccgacccgcgtgctcgaggccaagcgccaggaccggatgcag
gtggaaggcctggagcaggcgctcaccaagctcgatccgcgcagccgccgcatcatcgag
gcgcgctggctgcaggtcaacgacgacggctcgggcggcgccacgctgcatgagctggcc
gacgagttcggcgtttcggccgagcggatccgccagatcgagtccgccgcgatgaagaag
atgaagggcgcgctgcaggccttcgcatga
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