Cupriavidus cauae: KZ686_07955
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Entry
KZ686_07955 CDS
T08639
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccax
Cupriavidus cauae
Pathway
ccax03030
DNA replication
ccax03430
Mismatch repair
ccax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KZ686_07955 (dnaE)
03430 Mismatch repair
KZ686_07955 (dnaE)
03440 Homologous recombination
KZ686_07955 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccax03032
]
KZ686_07955 (dnaE)
03400 DNA repair and recombination proteins [BR:
ccax03400
]
KZ686_07955 (dnaE)
Enzymes [BR:
ccax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KZ686_07955 (dnaE)
DNA replication proteins [BR:
ccax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KZ686_07955 (dnaE)
DNA repair and recombination proteins [BR:
ccax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KZ686_07955 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Ski2_N
HROB
Motif
Other DBs
NCBI-ProteinID:
UZN47817
LinkDB
All DBs
Position
1:1785069..1788581
Genome browser
AA seq
1170 aa
AA seq
DB search
MSSPRFVHLRLHSEYSIVDGIVRLEDAVKAAAADGMGALALTDLANAFGLIRFYKEARGG
GVKPIVGADVWLTNADDRDKPARMLLLVQDRRGYLNLCVLLSRAWLSNQYRGRAELEPAW
LEEPGEDGLPLSTGLIALSGAMGGDVGQALANGNDAAAQRAARHWATVFPQRYYIELQRA
GHPGTEAYVQRAVQLAAALQLPVVATHPVQFMTPDDHTAHEARVCIAEGELLANPRRVRR
FTTDQYFKTQDEMCALFADIPSALENAVQIARRCNLTLELGKPRLPLFPTPDGMSLDDYL
VHMSKEGLERRLEVLFPDEATREARRPEYYARLEFETGIIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQHGRD
RVIQYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYNFVDGVAKLIPFKPGKLVT
IEEAKKEEPLLTERENNEEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGKLTDFCPLYT
QGGQNDGMSGVVSQYDKDDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPGKADWNCSQ
IPLDDPAAFDILKSANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVSLYRPGPMDLIPS
FCARKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKK
KPEEMAKHRELFREGAAKNGLSADKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLK
AHHPAEFMAANMSLAMDDTDKVKILYEDCRANGLRVLPPDVNASEYRFAPTDAKTIRYGL
GGIKGSGQGAIEDILRAREERPFTDLFDFCERVDRRQVNRRTIEALIRAGAFDTLHPNRA
QLLASVPRAMEAAEQKAESANQVSLFDLMADDGDAHRPELIDEPAWTPKRMLQEEKQALG
YYFSGHLFDAYRDEVRRFVKGTLASLEKEVQGNGGGYGRDVRGKMVAGVITGIRTQMTQR
GKMLIVLLDDGTGQIEMTVFNELFDANRHMFREDELLIAQGNARHDTFTGGVRFTAETVM
DLTTARIRNARALKLSLNGNSSTAMLRELLTPHLAASAGSPGLPVCIQYASASAVCEAVL
GQAWQVVPSDDTLAALRAALSPECVSTLYE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgccccgcttcgtacatctccgcctccattccgaatactcgatcgtcgacggc
atcgtccgcctcgaggatgcggtcaaggccgccgccgccgacggcatgggcgcgcttgcg
ctgaccgacctcgccaacgccttcggcctgatccgcttctacaaggaggcgcgcggcggt
ggcgtcaagcccatcgtcggcgccgacgtctggctgaccaacgccgacgatcgcgacaag
cccgcgcgcatgctgctgctggtgcaggaccggcgcggctatctgaacctgtgcgtgctg
ctgtcgcgcgcctggctgtcgaaccagtaccgcggccgcgccgagctcgagccggcctgg
ctcgaggaacccggcgaggacggcctgccgctgtcgacgggcctgatcgcgctgtccggc
gcgatgggcggcgacgtcggccaggcgctggccaacggcaacgacgccgccgcgcagcgt
gccgcccggcactgggccacggtcttcccgcagcgctattacatcgagctgcagcgcgcc
ggccatccgggcaccgaggcctatgtgcaacgcgcggtgcagctggccgcggcgctgcag
ctgccggtggtcgcgacgcatccggtgcagttcatgacccccgacgaccataccgcgcac
gaggcgcgcgtctgtatcgccgagggcgagctgctggccaatccgcgccgcgtgcgccgc
ttcaccaccgaccagtatttcaagacgcaggacgagatgtgcgcgctgttcgccgacatc
ccgtccgcgctcgagaatgcggtgcagatcgcgcgccgctgcaacctgacgctcgagctc
ggcaagccgcgcctgccgctgttcccgacgccggacggcatgtcgcttgacgactatctg
gtgcacatgtcgaaggaggggctggagcgccgtctggaggtgctgttccccgacgaggcg
acgcgcgaagccaggcgccccgagtactacgcgcggctggagttcgagaccggcatcatc
atcaagatggggttccccggctacttcctgatcgtggcggacttcatcaactgggccaag
aacaacggcgtgccggtcggccccggccgcggctcgggtgccggctcgctggtcgcctac
gcgctcggcatcaccgacctcgatccgctcaagtacgcgctgctgttcgagcgtttcctg
aatccggagcgggtgtcgatgcccgacttcgatatcgacttctgccagcacggccgcgat
cgcgtgatccagtacgtcaaggagaagtacggcaaggacgcggtgtcgcagatcgccacc
ttcggcaccatggccgccaaggccgcggtgcgcgacgtcggccgggtgctcgacctgggc
tacaacttcgtcgatggcgtggccaagctgatcccgttcaagccgggcaagctggtgacg
atcgaggaggccaagaaggaagagcccctgctgaccgagcgcgagaacaacgaagaggaa
gtgcgccagctgctcgagctggcgcagcgcgtcgaaggcatgacgcgcaacgtcggcatg
cacgccggcggcgtgctgatcgcgccgggcaagctgaccgacttctgcccgctgtacacg
cagggcggccagaacgacggcatgagcggggtggtcagccagtacgacaaggacgacgtc
gaggcggcgggcctggtcaagttcgactttctgggcctgaccacgctgaccatcctcgac
tgggccgagcgctacatccgccggctcgatccgggcaaggccgactggaactgcagccag
atcccgctcgacgatccagccgccttcgacatcctcaagtcagccaacacggtggcggtg
ttccagctggaaagccgcggcatgcagggcatgctcaaggacgccaagcccgaccgcttc
gaggacatcatcgcgctggtgtccctgtaccgccccggcccgatggacctgatccccagc
ttctgcgcgcgcaagcacggccgcgagaaggtggaatatccggacccgcgcgtcgaaccc
gtcctgaaagagacctacggcatcatggtctatcaggagcaggtgatgcagatggcgcag
atcatcggcggctactcgctcggcggtgccgacctgctgcgccgcgcgatgggcaagaag
aagcccgaggagatggccaagcatcgcgagctgttccgcgagggcgcggcgaagaacggg
ctgtcggccgacaaggccgacgagatcttcgacctgatggagaagttcgccggctacggc
ttcaacaagtcgcacgcggccgcctatgccttgctggcgtactacacggcctggctgaag
gcgcaccatccggccgaattcatggcggccaacatgtcgctggcgatggacgacaccgac
aaggtcaagatcctctacgaggattgccgcgccaacgggctgcgcgtgctgccgccggac
gtcaacgccagcgaataccgcttcgcgccgaccgatgccaagacgatccgctacggcctg
ggcggcatcaagggttccggccagggcgcgatcgaggacatcctgcgcgcgcgcgaggaa
cggccgttcaccgacctgttcgacttctgcgagcgcgtcgaccgccgccaggtcaaccgc
cgcacgatcgaggcgctgatccgcgccggcgccttcgacacgctgcatccgaaccgcgcc
cagctgctggcctcggtgccgcgcgcgatggaggccgcggagcagaaggccgagtcggcc
aaccaggtgtcgctgttcgacctgatggccgacgacggcgatgcgcaccgcccggagctg
atcgacgagccggcctggacgccgaagcggatgttgcaggaggaaaagcaggcgctcggc
tactacttctccggccacctgttcgacgcctatcgcgacgaggtgcggcgcttcgtcaag
ggcacgctggcgtcgctggaaaaggaagtgcagggcaacggcggcggctacggtcgcgac
gtgcgcggcaagatggtcgccggcgtgatcaccggcatccgcacgcagatgacgcagcgc
ggcaagatgctgatcgtgctgctcgacgacggcactgggcagatcgagatgacggtgttc
aacgagctgttcgacgccaaccggcacatgttccgcgaggacgagctgctgatcgcgcag
ggcaatgcccgccacgacaccttcaccggcggggtgcgcttcaccgcggaaaccgtgatg
gacctgaccaccgcgcggatccgcaacgcgcgcgcgctgaagctgtcgctgaacggcaat
tcgtcgaccgcgatgctgcgcgagctgctgaccccgcatctggccgcgtcggcgggcagc
cccgggctgccggtctgcatccagtacgccagcgcctcggcggtctgcgaggcggtgctg
ggccaggcgtggcaggtggtgccgtcggacgacacgctggcggcgttgcgggcggcgctg
tcgccggagtgtgtcagtacgctgtacgagtga
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