Cupriavidus cauae: KZ686_13220
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Entry
KZ686_13220 CDS
T08639
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ccax
Cupriavidus cauae
Brite
KEGG Orthology (KO) [BR:
ccax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccax03021
]
KZ686_13220 (rpoS)
Transcription machinery [BR:
ccax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KZ686_13220 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_Crp_2
HTH_20
KORA
ToxA_barrel
Motif
Other DBs
NCBI-ProteinID:
UZN48706
LinkDB
All DBs
Position
1:complement(2964159..2965325)
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AA seq
388 aa
AA seq
DB search
MPRQKTVSSGTVSRTRRAKQPEARSGVAHRDGQADGYDHDLAAELIPLTDEPIAPGAGSV
GLRETDLMADDGDAVARDDDEGERESDEEEGATEAVATEQDEFRSALHTELAADTVQHYL
NRISIKPLLSAPEELHFSTLAKDGDFSARQVMIERNLRLVVSIAKGYLNRGVPLLDLIEE
GNLGLMHAIEKFDPSRGFRFSTYATWWIRQSIERAIMNQARTVRLPVHVIRELNQVLRAK
RHLEKGGTDGRDASLEDIAHLLGKTPDEVQDVLALNEHTTSLDTPFDLDPGSSLLDFLSD
EHNAAPDQEVAHRELENLMKLWLARLSEKHRYVVERRFGLNHIEPATLEELAEEMGLTRE
RVRQIQQEALVKLKRHFASQGVRKDAVL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccagaaaacagtctcctccggaaccgtcagccgcacccgtcgtgccaagcaa
ccggaagcacgttctggtgtggcacatcgtgacggtcaagccgatggctacgatcacgat
ctggcggccgagctgattcccctgaccgacgaaccgatcgcacccggcgcgggctcggtc
ggtttgcgcgagaccgatttgatggccgacgacggcgacgcggtcgcgcgcgacgatgac
gaaggcgagcgcgagagcgacgaggaagagggcgcgaccgaagcggtcgccaccgagcag
gacgaattccgcagcgccctgcataccgaactcgccgccgataccgttcagcactatctg
aaccgcatcagcatcaagccgctgctgtcggctcccgaagaactccatttctcgacgctg
gccaaggacggcgatttctccgcgcgtcaggtcatgatcgagcgcaacctgcggctggtg
gtcagcatcgccaagggctatctgaatcgcggcgtgccgctgctcgatctgatcgaggag
ggcaacctcggcctgatgcatgcgatcgagaagttcgatccctcgcgcggcttccgtttc
tcgacctatgccacctggtggatccgccagagcatcgagcgcgcgatcatgaaccaggcg
cgcacggtccgcctgccggtgcacgtgatccgcgaactcaatcaggtgctgcgcgccaag
cggcatctggagaagggcggtaccgacggacgcgatgccagtctcgaggacatcgcgcat
ctgctcggcaagacccccgacgaagtgcaggacgtcctcgcactgaacgaacacacgacc
tcgctcgatacgccgttcgatctcgatccaggctcgagcctgctcgacttcctgtcggac
gaacacaatgccgcgccggatcaggaggttgcgcaccgcgagctcgagaacctgatgaag
ctgtggctggcgcggctgtccgaaaagcaccgctatgtcgtcgagcgccgcttcggcctg
aaccatatcgagccggccacgctggaagagctggccgaggaaatgggcctgacgcgcgaa
cgcgtgcgccagatccagcaggaagcgctggtcaagctcaagcggcatttcgcttcgcaa
ggggtgcgcaaggacgcggttctatga
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