Cupriavidus cauae: KZ686_14480
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Entry
KZ686_14480 CDS
T08639
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ccax
Cupriavidus cauae
Pathway
ccax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KZ686_14480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccax03019
]
KZ686_14480
Enzymes [BR:
ccax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KZ686_14480
Messenger RNA biogenesis [BR:
ccax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KZ686_14480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
P-loop_SecA
Utp25_C
HEM4
Motif
Other DBs
NCBI-ProteinID:
UZN48920
LinkDB
All DBs
Position
1:complement(3255308..3256807)
Genome browser
AA seq
499 aa
AA seq
DB search
MTTTTNTNTTAVPTSTDDITFDSFGLDPRVLRALTEQGYTKPTPIQAQAIPVVLLGKDVM
GAAQTGTGKTAGFALPIIQRLLPLANASASPARHPVRALMLAPTRELADQVYDNVARYAR
HTDLRSTVVFGGVDMNPQTDALRRGVEILVATPGRLLDHVQQKSVNLSQVQMLVLDEADR
MLDMGFLPDLQRIINLLPAKRQTLLFSATFSPEIKKLAASYLHQPVTIEVARSNSANENV
RQTVYQVQDGQKQEAVVHLLKQRAEQGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIH
GDKTQTERMQTLEGFKQGNIDALVATDVAARGLDIADMPCVINFDLPFNAEDYVHRIGRT
GRAGATGDALSIFVPGDERLLADIEKMLKRQIPRAQLEGFDPAAARFRAADDDRRRGRSS
EPRRPRADSEDRPRKTDHGNARNAFRPADDPFFSRPYEPSPSASSAPAEPTLDPRQVGLA
RARPKRPVAALLGGVPRKS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccacgaacacgaacaccactgctgtaccgacttccaccgacgacatcacc
ttcgacagcttcgggctcgacccgcgcgtgctgcgggcgctgacggagcagggctatacc
aagccgacgccgatccaggcgcaggcgatcccggtggtgctgctgggcaaggacgtgatg
ggcgcggcgcagaccggcaccggcaagaccgcgggcttcgcgctgccgatcatccagcgc
ctgctgccgctggccaacgccagcgcctcgccggcgcggcacccggtgcgcgcgctgatg
ctggcgccgacgcgcgaactggccgaccaggtctacgacaacgtggcccgctatgcgcgc
cacaccgacctgcgcagcaccgtggtgttcggcggcgtcgacatgaatccgcagaccgac
gcgctgcggcgcggcgtcgagatcctggtcgcgaccccgggccgcctgctcgaccacgtg
cagcagaagtcggtcaacctgtcgcaggtgcagatgctggtgctggacgaagccgaccgc
atgctcgacatgggcttcctgccagacctgcagcgcatcatcaacctgctgccggccaag
cgccagacgctgctgttctccgcgaccttctcgcccgagatcaagaagctggcggccagc
tatctgcaccagccggtgacgatcgaagtggcgcgcagcaattcggccaacgagaacgtg
cgccagaccgtgtaccaggtgcaggacggccagaagcaggaggccgtggtgcatctgctg
aagcagcgcgccgaacagggcctgtcgcgccagtgcatcgtcttcgtcaacagcaagatc
ggctgctcgcgcctggcgcgccatctggagcgcgagggcatcaatgccgccgcgatccac
ggcgacaagacccagaccgagcggatgcagacgctggaaggcttcaagcagggcaacatc
gacgcgctcgttgcgaccgacgtcgccgcgcgcggcctcgacatcgccgacatgccctgc
gtgatcaacttcgatctgccgttcaacgccgaggactatgtgcaccggatcggccgtacc
ggccgtgcgggtgccaccggcgacgcgctgtcgatcttcgtgccgggcgacgagcgcctg
ctggccgatatcgagaagatgctgaagcggcagattccgcgggcgcagctcgagggcttc
gatccggcggctgcgcgcttccgtgccgccgacgacgaccgccgccgcggccgctcgagc
gaaccgcgccgcccgcgcgccgacagcgaggaccgtccgcgcaagaccgatcacggcaat
gcgcgcaacgccttccggccggccgacgatcccttcttctcgcggccctacgagccgagc
ccgagcgcatcgtcggcgcctgcggagccgacgctcgatccgcgccaggtcggcctggca
cgcgcccggccgaagcgccccgtcgccgcgctgctcggcggcgtgccgcgcaagtcctga
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