Cupriavidus cauae: KZ686_20620
Help
Entry
KZ686_20620 CDS
T08639
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ccax
Cupriavidus cauae
Brite
KEGG Orthology (KO) [BR:
ccax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccax03016
]
KZ686_20620 (thpR)
Enzymes [BR:
ccax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KZ686_20620 (thpR)
Transfer RNA biogenesis [BR:
ccax03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KZ686_20620 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UZN50818
LinkDB
All DBs
Position
2:1190593..1191150
Genome browser
AA seq
185 aa
AA seq
DB search
MPRLFVALETPPALAASLLATLPRERGIRATPAAQVHLTLRFVGEVDEEKAAAIDATLAT
IAAVAVPVQVAGVGRFGRRGGILWAGVVPAEPLLALHGALDLALRDAGIEPETRPFHPHL
TLARCAPHAPEPLLREWVAAHRELACPSYLARRFVLFESRLQRQGAEHRCRRAFALREPE
RDNPP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgccacggctctttgtcgcactggaaaccccgcccgcgctggcggcctcgctactggcg
acgctgccgcgcgagcgcggcatacgtgcgacgccggccgcgcaggtccacctgacgctg
cgcttcgtcggcgaggtcgacgaggaaaaggccgccgcgatcgacgccacgctggccacg
atcgccgccgtggcggtcccggtgcaggtcgccggcgttggccgcttcggccggcgcggc
ggcatcctgtgggccggcgtcgtgcccgcggaaccgctgctggcactgcatggcgcgctc
gatctggcgctgcgcgatgccgggatcgagcccgagacgcgccccttccacccgcacctg
acgctggcgcgctgcgcgccgcatgcgcccgagccactgctgcgcgagtgggtcgccgcg
caccgggaactggcctgcccgtcctatctggcgcggcgcttcgtgttgttcgagagccgc
ctgcagcggcagggcgccgagcatcgctgccgccgtgcctttgccttgcgcgagccggag
cgggacaaccccccgtaa
DBGET
integrated database retrieval system
