Caretta caretta (Loggerhead turtle): 125620530
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Entry
125620530 CDS
T09292
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125620530 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125620530 (NUP93)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125620530 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
125620530
NCBI-ProteinID:
XP_048672290
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Position
12:complement(7413421..7539255)
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AA seq
819 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLESLSAVTTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKR
TFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQENEPSCISELGPPGRSSLDS
MEMAYARQIYIYNEKIVNGHVQPNLVDFCVAVAEQDDKNISDMWAMVKLMTEVLLVPASD
ALKVRTNMEVRMEFVRQALRYLEQSYKDYTLVTVFGNLHQAQLGGVPGTYQLVCSFLNIK
LPAPVPGLQDGEVEGHPVWALIYYCMRCGDLIAALHVVNRAQHQLGEFKTWFQEYMHSKD
KRLSPTTENKLRLHYRRALRNNTDPYKRAVYCIIGRCDIADNQSEVADKTEDYLWLKLNQ
VCFEDDGTSSPQDRLTLSQFQKQLLEDYGESHFAVNQQPLLYFQVLFLTAQFEAAIAFLF
RMERLRCHAVHIALVLFELKLLLKSSGQSAQLLSHEAGDPPGMRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDK
FTSDTKPIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELINKLLSPVVPQISTPQSNK
ERLKNMAHSIAARYKAQGISTKKSIDSTFYLLLDLITFFDEYHAGHLDRAFDIIEHLKLV
PLSQDCVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQYKRMKGTSPATPARPQRVMED
RDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacactgaagggtttggagaacttctccagcaagcagaacagcttgcagctgagaca
gagggcatctctgaacttcctcatgtagaacgcaacctccaggagatccaacaggcagga
gagcgtctgcggtctcggactctgacccgcacgtcgcaggagactgccgatgtcaaggca
tccgttcttcttgggtccagaggacttgacatatcccatatctctcagcggctggagagt
cttagtgcagtcactacatttgagcctcttgagcctgtgaaggacactgacatacaggga
ttcctgaagaatgaaaaagataatgctttgctgtcagccattgaagagtccaggaaaaga
acctttggtatggctgaagagtaccaccgagaatcgatgctggtcgaatgggaacaggtg
aaacaaaggatccttcatacgcttcttgcttcaggagaagatgctcttgactttacccag
gaaaatgagcccagttgcatcagtgagttgggtcctccaggtcgcagctctttggatagc
atggaaatggcctatgcccgacaaatttatatttataatgagaagatagtgaacggacat
gtacagcctaacctggtagacttttgtgttgctgttgctgaacaggatgataagaatatc
tctgatatgtgggccatggttaaactaatgacagaggtcttgctggttcctgcaagcgat
gcattgaaagtccggaccaacatggaggtgcgcatggagtttgtaaggcaggctctgcgg
tacctagaacaaagttacaaggattatactttggtgacagtatttggaaacttgcaccag
gctcagttgggtggagtacctgggacctaccaactagtctgcagtttccttaatatcaaa
ctcccagcacctgtccccggtctccaggatggggaggtggaaggccatcctgtttgggca
ttgatttactattgcatgcgctgtggagatttaatcgccgctttgcatgtggtgaatcgg
gcgcagcatcagctgggcgagtttaaaacctggttccaggagtatatgcacagtaaagat
aaaagattgtcccctaccacggaaaacaagcttcgcctccattacagacgagccctgagg
aacaatacagacccttacaaaagagctgtttattgtatcataggccggtgtgacatcgct
gataaccagagtgaagttgctgacaaaacagaagattatctttggctaaagctgaaccag
gtgtgttttgaggatgatggtaccagctccccccaggacaggttaacgttatcgcagttc
cagaaacaactacttgaagactatggcgaatcgcattttgcagtgaatcagcagcctctt
ctctacttccaagtattgttcttgacagcacagtttgaagctgcaattgcttttctcttc
cggatggagcgcttgcgttgtcatgctgttcacattgctttggtcctctttgagttaaag
ctgctcctgaaatcttctgggcagagcgcacagctgttaagtcatgaagctggcgaccct
cccggcatgaggcgccttaatttcgttcgccttttgatgctctacacccgtaaatttgag
tcaacggacccaagggaagctctgcagtatttttactttctcaggaacgagaaggatagc
caaggagagaacatgttcttgcgttgtgttagtgagctagtaatcgaaagtagagagttt
gatatgattctggggaagctggagaatgatggcagtaggaagccaggagtgatagacaag
tttactagtgacacaaaacctattattaacaaagttgcttcagcggcagaaaataaagga
ttatttgaagaagctgcaaaactttacgaccttgcaaagaatccagataaggtattagaa
ctgattaataaattactcagtcctgtggttccacagatcagcactccccagtctaacaaa
gagaggctgaagaatatggcacattccattgcagcgagatataaagctcaagggataagt
acaaagaaatccattgactccacattctaccttctgttagacttgatcacattttttgat
gaatatcatgccggccaccttgacagggcctttgatattattgaacatctaaagctcgtg
cccctgagccaagactgtgtggaagagagggtggctgccttcagaaatttcagcgatgaa
atcagacacaatttatctgaggtccttcttgcaaccatgaatattttgttcacgcaatac
aagaggatgaaaggcacaagccctgccactcctgcaagaccccagcgtgtaatggaggat
agagattcgcaactccgatcccaagctcgtgcactgataacgtttgctggaatgatcccc
tacagaacgtcaggagacacgaatgcaagactggtgcagatggaggtccttatgaattag
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