Caretta caretta (Loggerhead turtle): 125620540
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Entry
125620540 CDS
T09292
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125620540 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125620540 (VPS35)
Membrane trafficking [BR:
ccay04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125620540 (VPS35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
FerA
ADIP
Motif
Other DBs
NCBI-GeneID:
125620540
NCBI-ProteinID:
XP_048672318
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Position
12:18651716..18695071
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTVIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRFTLAPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGETGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDVVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaacacagcagtctcctcaagatgaacaggaaaagctcctggatgaagccatt
caggctgtaaaggtccagtctttccagatgaagcgatgcttggacaaaaacaagcttatg
gatgctctgaaacatgcctccaacatgcttggtgaactgcggacttctatgctatctcca
aagagctattatgaactctatatggctatttctgatgagctacactatttggaggtatat
ctgacagatgaatttgccaagggaaggaaagtggcagatctttatgaactagtacagtat
gctggaaatattatcccaagactctatctgctgataacagtaggtgttgtctatgtcaag
tcctttcctcagtccagaaaagatatcctgaaagatttggtggaaatgtgccgtggtgtc
cagcatcctctaagaggcttgtttcttcgaaactaccttcttcagtgtactaggaatatt
ttaccagatgaaggcgaacagacagacgaagaaaccaccggcgacatcagtgattccatg
gattttgtgctgctgaactttgctgagatgaacaaactctgggtgcgaatgcaacaccaa
ggacacagtcgagatagagaaaagagggagcgggaaaggcaggaactgaggatcctagtg
ggaacaaacttggttcgccttagtcaattggaaggtgttaatgtggagagatataaacag
attgttttgcctggaatattggagcaagtagtaaactgcagggatgctctagctcaggag
tatctcatggaatgtattattcaggttttcccagacgaatttcatctccagacccttaac
ccttttctccgagcctgtgcagaattacaccaaaatgtgaatgtgaaaaacattatcatc
gctttaattgacaggttagctttatttgctcaccgtgaagatggaccagggatcccagca
gatattaagctttttgacatcttttcgcagcaggtggccactgttatacagtctagacaa
gatatgccttcagaggacgtggtgtcattgcaagtatcgcttattaacttagctatgaaa
tgctatccagatcgtgttgactatgttgataaagtgttggagacaactgtggaaatattt
aataaacttaatctggaacatattgcaacaagcagtgctgtttcaaaagagctaacacga
cttttaaagatcccagttgatacctacaacaatatcctgaccgttctgaaactaaagcac
ttccacccgctctttgagtactttgactatgaatcaagaaagagcatgagttgttacgtg
cttagcaatgtactggattataacacagtaattgtctcccaagaacaggttgatgcaatt
atgaatctggtgtcaacactgatccaggaccaaccagatcagcctgctgaagaccctgac
cctgaggactttgctgatgagcagagccttgtgggaaggtttattcatcttctacattca
gatgatcctgatcaacagtatctgattttgaacactgcccggaaacactttggcgcaggt
gggaaccaacgtattcgtttcacactggcacccttggtttttgctgcataccagcttgcc
tttcgctacaaggagaattccaaagtggatgacaaatgggaaaagaaatgccagaagatc
ttctcatttgcacatcagaccatcagtgctttaatcaaagcagaattggcagagctgcct
ctgcggctctttctccaaggagcactggctgctggagaaactggttttgaaaaccacgaa
acagtggcctatgaattcatgtcccaggcattctctctgtatgaagatgaaatcagtgat
tcaaaagcacagctggctgcaatcaccttgataattggaacatttgaaaggatgaaatgc
ttcagtgaggagaaccatgagcctttgaggactcagtgtgcactggctgcttcaaagctg
cttaagaagccagaccagtgccgggctgtaagcacctgtgcccatctgttttggtctggc
cgaaacactgacaaaaatggagaggagcttcacggaggaaagagagtaatggaatgcttg
aaaaaggctctaaagatagcaaatcagtgcatggatccttcactccaagttcagcttttt
atagaaattctgaacagatacatctatttttatgaaaaggaaaatgatgtggtgacaatt
caggttttgaatcagctcatacaaaagatacgagaagaccttccaaaccttgaatctact
gaagaaactgaacaaattaacaaacattttcataacacactggagcacctgcgtttgagg
agggaatcaccagaatctgaagggccaatttatgaaggtcttgtcctttaa
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