Caretta caretta (Loggerhead turtle): 125620548
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Entry
125620548 CDS
T09292
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125620548 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccay01007
]
125620548 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125620548 (KARS1)
Enzymes [BR:
ccay01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
125620548 (KARS1)
Amino acid related enzymes [BR:
ccay01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125620548 (KARS1)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125620548 (KARS1)
Prokaryotic type
Other AARSs
125620548 (KARS1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
125620548
NCBI-ProteinID:
XP_048672328
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All DBs
Position
12:43017902..43036504
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AA seq
610 aa
AA seq
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MLSPAAVRLLGGRFGWVWRARQLRAACPALRRLQALHDQRSELKRRLKAERKVAEKEAKQ
KEQSEKHLSKSALTLGSENCNGADEESLDPNQYYKIRSQAIQQLKGTNEDPYPHKFHVDL
SLTDFIERYSHLQAGDHLRDITVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNY
KSEEEYIHINNKLRRGDIIGVQGNPGKTKKGELSVIPWEITLLSPCLHMLPHLHFGLKDK
ETRFRQRYLDLILNDYVRQKFIIRAKIITYLRSFLDELGFLEIETPMMNIIPGGAVAKPF
ITYHNELDMNLYMRIAPELYHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMA
YADYHDLMEITEKLLSGMVKHITGSYKVTYHPDGPEGHAYEIDFTPPFRKISMVHELERI
LGMKLPATDHFETEETRKFFDAICVERGVECPPPRTTARLLDKLVGEFLEVTCIHPTFIC
DHPQIMSPLAKWHRSQQGLTERFELFVMKKEICNAYTELNDPFQQRQFFEDQAKAKAAGD
DEAMFIDDNFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKKEVE
SSPSAEGTSV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccccgcagctgttcggctccttgggggccgctttggctgggtctggcgggct
cggcagctccgcgccgcctgccccgcgctccgaaggctccaggcacttcatgaccaaaga
agtgagctgaagagacgtttgaaggctgagagaaaagtagctgagaaagaggcaaagcaa
aaagagcaaagtgagaagcatctgagcaaatctgccttgaccctgggatctgagaactgc
aatggagctgatgaggaaagcctggaccccaatcaatattacaagatccgcagtcaggca
atccagcagctgaaaggcaccaatgaagatccttaccctcataagttccacgtagacctt
tccctcacagacttcatagagaggtacagccatctgcaggcaggagatcacctgagagac
attacagtgagagtggcaggtcgaatccatgcaaaacgtgcctctggagggaaactgatc
ttctatgatcttcgtggagagggagtcaaattgcaagtcatggcaaactccaggaactac
aaatcagaggaagaatatatccacattaacaacaagctgcgtcggggtgacattattggg
gttcaggggaatcctggaaagacaaagaaaggagagctgagcgttattccctgggaaatc
actctgctctctccatgcctgcacatgttgccccaccttcacttcgggctcaaagacaag
gaaactagatttcgccagagatacttggatttaattcttaatgactatgtgagacagaag
tttataatccgtgcaaagatcatcacatacctccggagcttcctggatgagttgggcttt
cttgagattgaaactcccatgatgaatattattccaggtggagctgtggctaaacctttc
attacctatcacaatgaactggacatgaacttatacatgagaattgctccagaactctat
cacaagatgttggtggttggaggcatggacagggtgtacgaaattgggcgccagttccgg
aatgaaggaattgatttgactcataatcctgaattcacaacctgtgagttttacatggct
tatgcagactatcatgacctgatggagatcacagaaaagttgctttcaggaatggtgaag
cacattactggaagttacaaggtcacttatcacccagatggtcctgagggtcatgcctat
gagatagatttcaccccacccttccggaaaattagcatggtgcatgaactggagagaatc
ctgggaatgaaacttccagcaactgatcactttgagactgaagaaactcgcaagttcttt
gatgctatttgtgtggagagaggtgttgagtgtccacctcccaggaccacggccaggctt
cttgataagcttgttggtgagtttctggaagtcacctgtatccatcccacattcatatgt
gatcatccgcagatcatgagccctttggccaaatggcatcgctctcagcagggactgaca
gaacgctttgaactctttgtgatgaagaaggaaatatgcaatgcatacacagagctcaac
gaccccttccagcagcggcagttttttgaagatcaagcgaaggcaaaagcagcaggtgat
gatgaagccatgttcatcgatgacaacttttgcactgcattggaatatggacttccaccg
acagctggatggggcatgggcatcgatcggctcaccatgttccttacagactccaataat
attaaggaagtgctgctgtttcctgctatgaaacctgaagacaataagaaagaggttgag
tccagtccctctgctgaaggcacctcagtgtga
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