Caretta caretta (Loggerhead turtle): 125620652
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Entry
125620652 CDS
T09292
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125620652 (TDRD12)
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
125620652 (TDRD12)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125620652 (TDRD12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
125620652
NCBI-ProteinID:
XP_048672592
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All DBs
Position
12:22494637..22614868
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AA seq
1258 aa
AA seq
DB search
MKMIEVLILKIEDPGCFWVFVKGCGPFVDSEMEYKKLHAEMNQFYNRDVEEVKPLTLEEG
QVCVVFCQELKCWCRAVVKSILFCADHYLAECFLVDYAKYIPVKTKNIRVAVEAFMQLPY
RAKKFRLYCTKPVTLCIDFCEDAAEIVPAKRWDSAAIQYFQNLLIGTTQIEAKLCAIEDD
IFDVYLYVTIKDEKVCVNDDLVAKNFAHYVMTKENTVNFAKSQKPWSSLSLKSSPEKVIN
PALALWPMLMQGKVHSNLATGDDASNSFLEKTCRKIAAPALNGKTESTVRATVGLSFKEN
INISEQPTVQVNRLLQFLNPDPLKTDVHYEQQEFQKINTEQPPIVLSNKIEPRSTLETTP
LLVDLKKELLRNKFLGPNLTESYCWPPIARGCDSVVISHHGNDPFLYIPPILTFLQSGSC
YKSLPTRNGPIALIVCPGWRKAQLVFELLEKYGRCSRPLHPVLILLGLNKEEAKNMKLQR
GCEVIVTTPHSLLRLLEHHSLLFLRLCHLVFDEVDNLFSEASKQIFTILEYYKKTITVEE
RESAPHQIVAVGNHWNKHIEHLTREFMNDPYIVITAMEEASIYGNVQQVVQLCLNCERTS
VLLQILDFTPSKTQKTLIFTNSADETEMVYKAVESSSIFCLKVHKQIEFHFKYAVEQWKK
KFSSGTHVVLVLTDDCMPSLGITDATCVVHFSFPASPRVFGVRLHSMSDNFQNVLEQGSS
VEQVYTKAKSILLLTERNGCHAVGVLRYLEHTEAKIPPELCDFTAGVLEAKEDMKLARPL
CQYLKRSGVCKDMRICPDRHRVHLQIDLPQKMSDNTIPMAGCVTIVPLHIVDATNYFGRI
IDKQKDQYAILAGEMIEYFKKARNKVCVEMVEKLALYGLHKDGLFHRVQVLEIPPKKENS
FFCNVTIRYIDEGRTGQVQVHQLFYLPTRFRILPPQAVEFIVCRVKPIDNEIEWNPKVTR
YIHHKIRGKLHEAKIVLALGNTIWVDPMVRVTKLSDLKTSINEYNIRSEILSMGMGTDNP
EHIKQLQKLCKHAKMLALEEKTLQTLVLSFTPKRSVLEQDVDSRQSVPEQDVASPHSLLM
GENFTDICNSSQMILENNQCDAISELKAEESTQHHRKCFYPEIKWFQKEDIVTMKIKIRN
IRDYKCEFFGDKVVFSAFSGDKFYVADMELHANILKGKSVCVIKNEEPVLILAKDKKEFW
CRLLKHKNPNVSFDFEHWEDFEDKSPFPVGTQKAHHSAALITEEMEESSEDSGTESDD
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattgaagtcttgatattgaagattgaagacccaggctgcttttgggtcttt
gtaaaaggatgcgggccttttgtagacagtgaaatggaatataaaaaactgcatgctgaa
atgaatcagttctataaccgagatgtggaggaagtaaagccattaacattagaagaaggg
caggtttgtgtggttttttgtcaggaactgaaatgctggtgtagagcagttgttaagtca
atcctgttctgtgctgatcattacctagcagagtgtttccttgtggattatgccaagtat
attcctgttaaaacaaaaaacattcgggttgcagtggaagcatttatgcaactcccatat
agagcgaaaaagtttagactgtactgcacaaagccagtcacgttgtgtatagatttctgt
gaagatgctgcagaaatagtacctgcaaagagatgggacagtgctgctattcagtacttt
caaaaccttctaataggaaccacccagattgaggcgaagttatgtgcaatagaagatgac
atttttgatgtttatctttacgtaacaataaaagatgaaaaggtatgtgttaatgatgat
cttgttgcaaagaactttgctcattatgtgatgactaaagaaaacacagttaattttgcc
aaaagccaaaagccatggtcctcattaagtctgaagtcttctccagagaaagtgatcaat
cctgcacttgctctttggccaatgttaatgcaggggaaggtacacagtaatcttgcaaca
ggtgatgatgcttctaattcttttcttgaaaagacatgcagaaaaattgctgcacctgct
cttaatggaaaaactgagtctactgtcagagcaactgtgggtttgtcttttaaagaaaat
ataaatatttctgagcagcctactgtgcaggtaaacaggctcctgcagtttttgaatcct
gatccgttgaaaactgatgttcattatgagcagcaggagtttcaaaagatcaatacagaa
caacctcctattgttctcagcaacaaaatagagccacgttcaactcttgaaacaacacca
cttttggtagatctgaaaaaggagcttctccggaataaatttctaggtcctaatctcaca
gaatcttattgttggccaccaatagctcgtggatgtgattcagttgtcatttctcatcat
ggaaatgatccttttttgtatattccacccattcttacatttttacaatcagggagctgc
tacaagtctctgccaactaggaatggaccaatagcattaatcgtatgtcctgggtggagg
aaagcacagcttgtttttgaattattggaaaaatatggcagatgctccaggccacttcat
ccagtgttgatattattaggactgaataaagaagaagccaaaaatatgaaacttcaaaga
ggatgtgaagtgattgtaactacaccacacagccttttgagactgcttgaacaccatagc
ttattatttcttagactttgtcatcttgtttttgatgaagttgataacttgttctctgaa
gctagcaaacaaatatttactatattagagtattacaagaaaacaattactgttgaagag
cgggaatcagcaccacatcaaattgttgctgttggaaatcattggaataaacatatagaa
catttaacaagagagttcatgaatgatccttacattgtgataacagctatggaagaagct
tccatatatggaaatgtgcaacaggtggtgcaactttgcttgaactgtgagagaacctct
gtattactccagatactggattttactcccagtaaaactcaaaagactctgattttcact
aattctgcggatgaaacagaaatggtctataaagcagtggagagtagttccatattctgc
ttgaaagtacacaaacaaattgaatttcatttcaaatatgccgtagagcaatggaaaaaa
aaatttagttctggcacccatgttgtgttagttttaactgatgactgcatgccgtccttg
ggaattactgatgcaacttgtgtggttcattttagttttcctgcttctccaagagtcttt
ggtgtgcgcttacacagcatgtctgataacttccagaatgtactagaacagggttcctct
gtagagcaagtatatacaaaggcaaaatcaatcttattgctgacagaaagaaatggatgc
catgcagttggtgtactgcgttatttagaacacacagaagctaaaattccaccggaactg
tgtgactttacagcgggggtgcttgaggctaaagaagatatgaaacttgcaaggcctctt
tgtcagtaccttaaaagatctggtgtttgcaaggatatgagaatatgtccagatcgtcat
cgagttcacttacaaatagacttaccccaaaagatgtcagataacactataccaatggct
ggatgtgtcacaatagtacctctccacattgtggatgcaacaaactacttcggtcgcata
atagataaacaaaaggaccaatatgcaattcttgctggagagatgattgagtattttaag
aaagctaggaataaagtgtgcgttgaaatggtggagaaactagcactgtatggattacac
aaagatggtctttttcacagggttcaagtgttggagatacccccaaaaaaagaaaatagt
ttcttctgtaatgttactatcaggtatatagatgaaggcagaactggtcaagttcaagtt
catcagctgttttacttacctacaagatttcgaattttgccaccacaggctgtggaattt
attgtttgtagggtgaaacctattgataatgaaattgaatggaaccctaaggttactaga
tatattcatcacaaaattagaggaaaacttcatgaagcaaaaatagtgcttgccttggga
aatacaatttgggttgatccaatggtccgggtcaccaagctttcagatttgaagacttct
atcaatgaatataatattcgatctgagattttgtctatgggtatgggaactgacaatcca
gaacatataaaacaacttcaaaagttgtgtaaacatgcaaaaatgttagctcttgaggag
aaaaccttgcaaactttagtgctttcttttacacccaaaagaagtgtgctggagcaggat
gtggacagccggcagagtgtgccggaacaggatgtggccagtccacatagcttattaatg
ggagaaaatttcacagacatttgcaatagctctcaaatgattttggaaaataatcagtgt
gatgctatatctgaacttaaagcagaagaatctacacagcatcatcgtaaatgtttctat
ccagaaataaaatggtttcaaaaggaagatattgttaccatgaagataaaaataagaaat
atacgtgactataaatgtgaattttttggagataaggttgttttcagtgctttttcagga
gacaaattttatgtggctgacatggagttgcatgcaaacatacttaaaggaaagtctgtt
tgtgtgattaagaatgaagaacctgttcttatccttgcaaaagacaagaaggaattttgg
tgccgtctactaaagcataagaatcctaatgtgtcttttgattttgaacactgggaagat
tttgaagataaaagcccctttcctgttggtacacaaaaagcacatcattctgctgcattg
ataacagaagaaatggaagaatcctcagaagatagtggaacagagagtgatgactag
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