KEGG   Caretta caretta (Loggerhead turtle): 125620749
Entry
125620749         CDS       T09292                                 
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125620749 (EXOSC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccay03019]
    125620749 (EXOSC6)
Messenger RNA biogenesis [BR:ccay03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     125620749 (EXOSC6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 125620749
NCBI-ProteinID: XP_048672815
LinkDB
Position
12:complement(3184544..3185425)
AA seq 267 aa
MALDHRRVPGPEESQAPLLYAAPGEAGTDAPGREAAALRPLLARAGLLSQAEGSAYVELA
GGTKVLCAVRGPREAAEGRGRLLCEFRRAPFSVRGARPRPGPATAARERELGLALQEALA
PAVRLARYPRARLELTALVLQDGGSALAAALSAAALALADAGVEMFDLVVGCGLCRAPGP
GGAWLLQPSEAEERAAAARLTVALMPGLNQVAGLLGSGQGGPPESWAQAVRLGLEGCQRL
YPVLRRSLLRAAERRAAEGPRAVGASA
NT seq 804 nt   +upstreamnt  +downstreamnt
atggcgctggaccaccggcgcgtgccgggcccggaggagtcgcaggccccgctgctgtac
gcggcgcctggcgaggcgggcacggacgccccgggccgggaggcggcggcgctgcggccg
ctgctggcgcgggccgggctgctgagccaggccgagggctcggcctacgtggagctggcc
ggcggcaccaaggtgctgtgcgccgtgcgcgggccgcgcgaggcggccgagggccgcggc
cggctgctctgcgagttccgccgcgcgcccttctccgtccgcggcgcgcgcccgcggccc
ggcccggccaccgccgcccgcgagcgcgagctgggcctggcgctgcaggaggcgctggcg
ccggccgtgcgcctggcgcgctacccgcgcgcgcggctggagctgacggcgctcgtgctg
caggacggcggctcggcgctggcggccgcgctctccgccgccgccctggcgctggccgac
gcgggcgtggagatgttcgacctggtggtgggctgcggcctgtgccgcgcgcccgggccc
ggcggcgcctggctgctgcagcccagcgaggccgaggagcgcgcggccgccgcccgcctc
accgtggccctcatgcccggcctcaaccaggtggccgggctgctgggcagcggccagggc
gggccgcccgagagctgggcccaggccgtgcggctcggcctggagggctgccagcgcctc
tacccggtgctgcgtcgcagcttgctgcgcgccgccgagcgccgggcggccgagggcccg
cgggccgtgggggccagcgcctga

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