Caretta caretta (Loggerhead turtle): 125620749
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Entry
125620749 CDS
T09292
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125620749 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125620749 (EXOSC6)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125620749 (EXOSC6)
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Ortholog
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GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125620749
NCBI-ProteinID:
XP_048672815
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All DBs
Position
12:complement(3184544..3185425)
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AA seq
267 aa
AA seq
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MALDHRRVPGPEESQAPLLYAAPGEAGTDAPGREAAALRPLLARAGLLSQAEGSAYVELA
GGTKVLCAVRGPREAAEGRGRLLCEFRRAPFSVRGARPRPGPATAARERELGLALQEALA
PAVRLARYPRARLELTALVLQDGGSALAAALSAAALALADAGVEMFDLVVGCGLCRAPGP
GGAWLLQPSEAEERAAAARLTVALMPGLNQVAGLLGSGQGGPPESWAQAVRLGLEGCQRL
YPVLRRSLLRAAERRAAEGPRAVGASA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggaccaccggcgcgtgccgggcccggaggagtcgcaggccccgctgctgtac
gcggcgcctggcgaggcgggcacggacgccccgggccgggaggcggcggcgctgcggccg
ctgctggcgcgggccgggctgctgagccaggccgagggctcggcctacgtggagctggcc
ggcggcaccaaggtgctgtgcgccgtgcgcgggccgcgcgaggcggccgagggccgcggc
cggctgctctgcgagttccgccgcgcgcccttctccgtccgcggcgcgcgcccgcggccc
ggcccggccaccgccgcccgcgagcgcgagctgggcctggcgctgcaggaggcgctggcg
ccggccgtgcgcctggcgcgctacccgcgcgcgcggctggagctgacggcgctcgtgctg
caggacggcggctcggcgctggcggccgcgctctccgccgccgccctggcgctggccgac
gcgggcgtggagatgttcgacctggtggtgggctgcggcctgtgccgcgcgcccgggccc
ggcggcgcctggctgctgcagcccagcgaggccgaggagcgcgcggccgccgcccgcctc
accgtggccctcatgcccggcctcaaccaggtggccgggctgctgggcagcggccagggc
gggccgcccgagagctgggcccaggccgtgcggctcggcctggagggctgccagcgcctc
tacccggtgctgcgtcgcagcttgctgcgcgccgccgagcgccgggcggccgagggcccg
cgggccgtgggggccagcgcctga
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