Caretta caretta (Loggerhead turtle): 125620850
Help
Entry
125620850 CDS
T09292
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04137
Mitophagy - animal
ccay04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125620850 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125620850 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125620850 (AMFR)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
125620850 (AMFR)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125620850 (AMFR)
Multi subunit type E3
ERAD complex
125620850 (AMFR)
LMBR1L-GP78-UBAC2 complex
125620850 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
125620850
NCBI-ProteinID:
XP_048673000
LinkDB
All DBs
Position
12:7682392..7718663
Genome browser
AA seq
641 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSALGLLGSVVSAYRALSQGPAGQPGPRGPSEQEPPSAGES
ARGAGPLPLDIAYYLLSDSLCVWVLVNTACCFLMLIAKLIQCAVFGPLRVSERQHLKDKF
WNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSS
HVRVLTLLIAMLLSCCGLAVICGVIGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLW
DLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLF
HEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQTARKLPCGHLFHN
SCLRSWLEQDTSCPTCRLSLNITDNHRVREDHQRENLDENLVPVAVAEGRPRLNQHNHFF
HFDGSRIASWLPSFSVEVMHTTNILGIAQASNSQLNAMAHQIQEMFPQVPYHIVLQDLQL
TRSVEITTDNILEGRIQVPFPTQRPDSVRPASNSPVERHNSDQEEAETATQTERVPLELS
PRLEEMVEFSEMEAEPSETEDFEARGSRFSKSVDERQRMLVQRKEDLLQQARKRYLNKTS
DEDSTSESPFLSEGAASDPVTVRRRMLAAAAERRLQMQQTL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctggagcgcttcccctggcccagcctccgcacctacacggggctc
agcgcgctggggctgctcggcagcgtcgtcagcgcctaccgcgccctcagccagggcccc
gccgggcagcccgggccccgggggccctcggagcaggagccgccgtccgccggggagtcc
gcgcgcggagccgggcccctgcccctggacatcgcctactacctgctgtcggacagcctc
tgcgtctgggtactcgtaaatactgcctgctgttttctgatgttgattgctaaactaatc
cagtgtgccgtgtttggtcctcttcgtgttagtgagaggcagcatctcaaggacaaattc
tggaatttcatcttctacaagtttatctttatttttggtgtgctgaatgttcagacggtg
gaagaggtggtcatgtggtgcctctggttctctgggcttgtgtttctccacctcatggtt
cagctctgcaaggatcggtttgaatatctttccttctctccaaccaccccaatgagcagc
cacgtcagagtcctgactctgctgattgccatgttactctcctgttgtggtctagcagtg
atctgtggagttatcggctatacgcatggaatgcacactctagctttcatggcagcagag
tctctacttgtgaccgtgagaactgctcatgtgattttacgttatgtaattcatctctgg
gatctcaaccatgaaggaacctgggagggcaagggaacgtatgtgtattatacagatttt
gtcatggagctaaccttgctttcactggacctgatgcatcatattcacatgctgctgttt
ggaaatatctggttgtcaatggccagcctggtgatttttatgcagctgcgttatttgttc
catgaggttcagcgtagaatccgtcgtcacaagaactacctacgtgtggttggaaacatg
gaagctaggtttgcagttgcaactcctgaagagctagctgtcaataatgacgactgcgcc
atttgttgggactccatgcagactgcccgtaaactcccatgtgggcatctcttccacaac
tcatgcctgcgttcctggcttgaacaggatacatcctgccccacctgtagattgtctctc
aatatcactgacaaccaccgagttagggaggaccaccagagggagaacctagatgagaac
ttggtacctgtggcagtagcagaaggcagacctcgcttgaaccagcacaatcacttcttc
cacttcgacggctctcgtatcgctagctggctgcccagtttttcagtggaagtgatgcac
actactaatatcctgggtattgcgcaagcgagcaactcacagctcaatgctatggcccat
cagattcaagagatgtttcctcaggttccctaccatatagttctacaggatctgcagctg
acacgctcggtagaaataacaacggacaacatcttagagggacgtatccaggtacctttc
ccaacacagcgtccagatagtgttagacctgcgtcaaacagtccagtggaaaggcataat
tccgatcaggaggaagcggaaactgctactcagactgagagagtaccacttgaactcagt
ccgagactggaagaaatggtggagttcagtgaaatggaagcagagcccagtgagacagaa
gattttgaggccagaggaagtcgcttctccaagtctgttgatgaaaggcagcgtatgtta
gttcagcggaaggaagacctgctgcagcaagctcgcaagcgttatttaaacaaaacctct
gatgaggactccacctccgagagcccctttctgtctgagggtgctgcctctgaccccgtc
accgtgcgccgcagaatgttagccgctgctgccgaacggagattgcagatgcaacagacc
ttgtag
DBGET
integrated database retrieval system
