Caretta caretta (Loggerhead turtle): 125620864
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Entry
125620864 CDS
T09292
Symbol
FANCA
Name
(RefSeq) Fanconi anemia group A protein isoform X1
KO
K10888
fanconi anemia group A protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125620864 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125620864 (FANCA)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
125620864 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_CTD
FANCA_helical
Motif
Other DBs
NCBI-GeneID:
125620864
NCBI-ProteinID:
XP_048673019
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All DBs
Position
12:complement(39795283..39864449)
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AA seq
1472 aa
AA seq
DB search
MGAQGGLVGCRPGAVAEEKAVAALGLAGMATSPSGRRGSRALSELLAGRVKKQKCTFDSG
QEFQKAAVHLLSCHQNLNDLLLEVESSSKSTEQSGPEPQSAFSESFVVSILQEQASRLGV
PMGILSANTTATNIEQICKTSMESNQVALLNLEQRKKLSCLLQTVKDLLVHNAFCRLLFC
QELWKKQNPPVLEVVWHLHRGNIVSLGELLESNSDTPAVVEWLCSSLCLLCKQTDSSSLD
VELSGHILSDFMIVFLQNGFQQTSDPEKKVEFQKIPHICYAVLQKMLTWVLDAVANEKQE
DSSKLQAVKCWLNIFTVTMYKSTNFPESLQQFFIHTLTEILTYNPLLKASDAIHMQREWS
FARICPLLTTLYRKLFVAFSAEKLMCHLQQILETHEVNWQHVLSCFSTLVVCQTEAEQLV
KDLLSSLLIKAFENYDMENMITAFLIARQAALEGPAVFMPYAEWFKVSFGNASGYHGSSK
KALVFLFEFLSELVPFEAPQYLKVHIMHPPFVPTKYRPFLLEYITLAKTRLADLKVAIED
MGLYEDLSSTKEAVQPQSQALEDVEKAIRIFENTGKIPTSVMEASIFRRPYYTSHFIPAL
LMPRVLPEIPDSRIVFIDSLKRADKIPPNLYSRYVQACHSLKEKHLQDGSIEIETDHLKE
PVEQLKAELDELIMLITDQSKHDAVPAQIALISERLMTVLGHRNNENEAASFNSLIQLNI
CSPKLEQQDQCVIDLLLTSFCQNLIAASYFNPPDRQGLCLSLFVKMICGHRRVLPALLTR
LCQLIYHQGPSLNDAHVLGLAAFMIHLNESKSLIPEVNIGSKVASAKGLSVTEYWNHLLV
CRTGESLAFCMRFCTAAVAYCLCKFPSLSHDDLCNLLPSGVIKKLQYVVPRLSLEARGIG
REEEAPELSWRSLSCPSVNYTKTSLCLWKQTCFQELLKEKLFQLSFQEWLLFELEVQPEK
DILSASERHDFHYWALYQWYLPAASASGGCDGNLEKACGILIGTILDFSQRSELDNCGQL
EKSEFSVHNRTVNPDILCRLQEMVLELGSRQTSPTGCWNDKGHFLFRIFQERLKTIGNGS
AVGERLLRQQEVLLQKRILLCLPPSVLIMMCRRGKKMTLDCEDFFFFVNTELRNICSRGC
ALSYDITAHFLRGLLNASLDYEESAQGINDVLKTCRTKCPIIISSAALWWLRLEPVLCSQ
WKRLFGAPLAQELQRLRKCQHSATSFLSLEAEFSLSDTPWISAAFLHFTVQQQAAHGRMR
DVLKRVGSDTEQLLVCLLFFSLMDLIFTRLAPKQGTEFQKSLEWCLEILGCLEEQGVSWL
ALFHSAEKDRGLYQILHSAASDQYISLLPIAFYSLIPCFHQNLLNREQTFLYVAVDMYTQ
LLRLYIEGENPRRSDQGGQSLPSVKHVDSLEVLTKARQFLLHSIARCPKNSFVHIQQLLD
PCEEFDPEVKAALFHSWKLTVAEDLYDEPVLF
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgcagggcgggctggttggttgcagacccggcgccgtcgctgaggagaaggcg
gttgcggcgctcggcttagcggggatggccaccagcccgagcgggcggaggggcagccgg
gctctctccgagctgctggcaggaagagtcaagaaacagaaatgcacatttgacagtgga
caggagtttcagaaagcagctgttcaccttctgagttgccatcagaacttgaatgacctc
ttgctggaggtggagagttccagtaaatcaactgaacagagtggtccagagcctcaaagt
gctttttcagaatcatttgtagtctccattctgcaggagcaggcctcgaggctgggagta
ccaatgggaatcttgtcagccaataccactgctaccaacattgaacagatttgcaaaact
tccatggagtccaaccaagttgcactgttgaacttggagcagagaaagaaattgtcttgt
ttgcttcaaactgtcaaggatttgttggtgcacaatgccttctgtcgtttgctcttctgt
caagaactgtggaaaaagcagaatcctcccgtgttggaagttgtgtggcacctgcacaga
ggcaacattgttagcttgggagagctgctggagagcaattcagacacccctgctgtggtg
gagtggctatgcagcagcctttgtctgctttgtaagcagacagacagttcttccctggat
gtggagctttctgggcacatactctcagactttatgattgtgtttcttcagaatggattt
cagcaaacttcagatccagaaaagaaggtggaattccagaaaatcccccatatctgttat
gctgtactgcaaaaaatgttgacatgggtacttgatgctgttgctaatgaaaaacaggaa
gattcttctaaattacaggctgtgaaatgctggctgaacatattcactgtgacaatgtac
aaaagcaccaactttccagagtctttgcaacagttcttcattcacaccctgactgagatt
cttacctataatcctttgttgaaagcatctgatgccatacatatgcagagagaatggagt
tttgcaagaatctgcccactgcttactaccttgtatcgcaaactgtttgtggcattcagt
gcagagaagttgatgtgtcatttgcagcagattctggagactcatgaggtgaattggcag
catgtgctgtcctgcttttctacattggtagtctgccagactgaagcagagcagctggtt
aaagacctactgagcagtctgctgataaaagcctttgagaattacgatatggaaaacatg
atcactgcattcttgatagctcgtcaggctgcccttgagggtcctgctgtgttcatgcct
tatgctgaatggtttaaggtttcctttggcaatgccagtggttaccatggtagcagtaag
aaggctttggtctttctcttcgagttcctatcagaattggttccctttgaagcaccccaa
tatctgaaggtccatatcatgcatccacctttcgtaccaacaaaataccgtccctttctc
ttggaatatatcactctggccaaaacccgattggctgatctcaaggttgctatcgaagac
atggggctctatgaggatttatcttcaacaaaggaagctgtgcagccccagagccaggca
cttgaagatgttgaaaaggccattcggatatttgaaaatacagggaagatcccaacaagt
gtgatggaggccagtattttcagaagaccctattatacttcccactttattcctgcttta
ctcatgccacgtgtgctccctgaaattccagactcacgcatcgtttttatagactcctta
aagagagctgacaaaattccaccaaacttgtactccagatatgtccaagcttgtcattct
ttgaaagagaaacacttacaagatggatcaatagaaatagagactgaccatctcaaagag
cctgttgaacagctgaaggctgaactggatgaactgatcatgctgatcacagaccaaagc
aaacatgatgctgtgccagcccagattgcactgatctctgagagactgatgactgtcctg
ggacatcgcaataatgaaaatgaagctgcatccttcaattctctgatccaacttaacatt
tgttccccaaaacttgaacagcaggatcagtgtgtcattgatcttttactgacatccttt
tgccagaatctaatagctgcttcctattttaaccctcctgacaggcaggggctctgtttg
tctctgtttgtgaagatgatttgtgggcacaggcgtgtcttacctgccctgttgactagg
ctctgtcagcttatttatcatcagggtccttccctaaatgatgctcatgttttaggacta
gctgcctttatgattcatttaaatgaatccaaatctttgattcctgaagtgaacattgga
tccaaggttgcctctgcaaagggcctttctgttactgagtactggaaccatttacttgtt
tgcaggacaggggagtccttagccttctgcatgaggttttgtactgcagcagttgcttat
tgtttgtgcaagtttccttccctctctcatgatgatttatgcaacttgcttccctctggc
gttataaaaaagttacagtatgttgtgccacggctgagcttagaggctcgcggaattggc
cgtgaggaggaagcacctgaactgtcctggaggtccctctcttgtccctctgtaaactac
acgaaaaccagcctctgtttatggaagcaaacgtgcttccaagaactcttgaaggagaaa
ctattccagttatctttccaagagtggctgctgtttgagctagaagtccagcctgagaag
gatatcctttctgcttctgaaaggcacgacttccattactgggcgttgtaccagtggtat
cttccagcagcttctgcttctggaggctgtgatggaaacctggaaaaggcatgtggcatt
cttattggtacaattctggatttctcccaaaggtcagagttggacaactgtggacagttg
gagaagtcagagttttccgttcataacaggacagtcaatcctgatattctctgcagatta
caggaaatggtacttgagctagggtctaggcagacttcacccactggctgctggaatgac
aagggacacttcctattcaggattttccaggaaaggttaaaaactataggaaatggctct
gctgtaggtgaacggctactgaggcagcaggaagtgctactgcaaaaaaggattctgttg
tgtctccccccatcagttctcatcatgatgtgtcgaagaggaaagaaaatgaccttggat
tgtgaagatttctttttttttgtaaacactgagctgaggaacatttgttccagaggatgt
gcactctcctatgacatcacagctcacttcttaaggggtctgttgaatgccagtttggat
tatgaggaatcagcacaagggattaatgatgttttgaaaacatgtcgaaccaaatgtccc
attatcatttcttctgcagcgctgtggtggctgaggttggagccggtgctttgctcccag
tggaagaggctgtttggggctccacttgcacaggaattgcagagactgaggaaatgccag
cattctgctactagcttcctctctttagaagcagaattttccctatctgatacaccctgg
atttctgcggcctttctacacttcactgttcaacagcaagcagcgcatggaagaatgaga
gacgtgctgaagagagtggggtctgatacagagcagctcctagtgtgtctgctgttcttt
tcactcatggatctcatcttcaccagattagcaccaaagcaagggacagagtttcagaaa
tctttggaatggtgcctggagatcctcggatgcttggaagaacaaggcgtgtcctggctc
gctctctttcactcagcagagaaagaccggggactgtatcaaattctacacagtgctgcc
tcagaccaatacatcagcctgttgcctattgcgttctacagccttatcccctgctttcac
caaaacctacttaacagagagcaaaccttcctttatgttgctgttgacatgtatacccag
ctgcttcgactctacatagaaggggagaatcctcggagatcagatcaggggggacaaagc
ctacccagcgtgaagcacgtggattctttagaggtgttaactaaggctcgtcaatttctg
ctacattcaattgcacggtgccctaaaaacagctttgtacatatacaacagttactggat
ccctgtgaagagtttgacccagaggtgaaagctgccctcttccattcctggaagctcact
gtagctgaggatttgtatgatgaaccagtcctcttctga
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integrated database retrieval system
