Caretta caretta (Loggerhead turtle): 125621077
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Entry
125621077 CDS
T09292
Symbol
VARS1
Name
(RefSeq) LOW QUALITY PROTEIN: valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125621077 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccay01007
]
125621077 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccay03016
]
125621077 (VARS1)
Enzymes [BR:
ccay01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
125621077 (VARS1)
Amino acid related enzymes [BR:
ccay01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125621077 (VARS1)
Transfer RNA biogenesis [BR:
ccay03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125621077 (VARS1)
Prokaryotic type
125621077 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
GST_C_2
Val_tRNA-synt_C
Snapin_Pallidin
Arc1p_N_like
Jag_N
tRNA-synt_1e
GST_C_3
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
125621077
NCBI-ProteinID:
XP_048673480
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All DBs
Position
13:complement(1947086..1962916)
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AA seq
1274 aa
AA seq
DB search
MPTLYLSPHPDNFQNHRVLIAARYAPALPEVVELPEQGLPPQPPAPCPVPKLPALESRLG
VWVSGPAAVAHLLSPERLRGQGPAGGALVQQWVSYAEGEIAPAACTAAFSALGLAEQSKQ
VVERAVAELRRALAVLDGHLKLRTYLVDEAVTLADVTVACALLLPYKYVLDPPSRAPYPN
VLRWFLTCVNQPQFQAVLGPVKLCEQARGGDTPRPKTQAEHVGPAEKGPAVGSAPGPGEA
PVKSASQLKKEAKKKEKLEKFQQKKEKSQQQQGEKKVKAEKKEKKDPGVLTYDAPTHPGE
KKDVTGPMPDAYSPQYVEAAWYPWWESQGFFKPEYGRQCVSERNPKGLFMMCIPPPNVTG
SLHLGHALTNAIQDALTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGQTRHDLG
XEAFVREVWKWKNEKGDRIYHQLKKLGSSMDWDRACFTMDPKLSCAVQEAFVRLHEEGVI
YRSKRLVNWSCTLHSAISDIEVDKKELPGRTLLPVPGYKDKVEFGVLVSFAYKLEDSDEE
VVVATTRVETMLGDTAVAVHRQDPRYQHLHGKRVLHPXTGRRMPIVCDDFVDMGFGTGAV
KITPAHDHNDYEVGQRHGLDCITIIDDSGSLINVPPPFLGMKRFEARGAVLEALKQKGLF
KEVKDNPMVVPVCSRSKDVVEPLLKPQWYVRCEGLARGAADAVRRGDLRILPPFHCKTWF
QWMDNIRDWCISRQLWWGHRIPAYFVTVDDPSVPPGEDTDGRYWVSGRSEEEAKDKAAKA
FGVTPDKISLRQDDDVLDTWFSSGLFPFSIFGWPNSSEDLQVFYPGTLLETGHDILFFWV
ARMVMLGLKLTGKLPFREVYLHAVVRDAHGRKMSKSLGNVIDPLDVISGITLEGLHAQLL
ESNLEPAEVERARQGQKSDYPAGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFC
NKLWNATKFAVRALGPGFQPPPGPEPGRAESLIDRWILSRLSLAVELSDAGFRAYDFPAV
TTAVYNFWLYELCDVYLECLKPVFAEGGASAVTAARSTLYTCLDAGLRLLAPFMPFVSEE
LFQRLPRRSPHAPPSICVTPYPSTEQFCWRDWGLEGTVEFSLGIVRAVRSLRADYNLTRT
RADCFLQCPDSGAADAASRCSPYIRSLSSSGRVRVLGPGEAPPAGCAVAVASDKCTVHLL
LKGLIDAEKEISKLAGKQGELQKQIERLRERMETPDYGTKVPPKVQEADAAKLQQSRTEL
QKVMEAVETFQRMI
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctgtatctctccccgcacccggacaatttccagaaccaccgggtgctgatc
gcagcccgctatgccccggcgctgcccgaggtggtggagctgccggagcaggggctcccc
ccgcagccccctgccccctgccccgtgcccaagctgccggctttggagagccggctgggg
gtctgggtctcgggcccggccgcggtggctcatctcctgtccccggagcggctgaggggg
caggggccggcggggggcgctctggtgcagcagtgggtgagctacgctgaaggggagatt
gcccctgccgcatgcacagccgccttctccgccctgggtctggcggagcagagcaagcag
gtggtggagcgggcggtggccgagctgcgccgggcgctggccgtgctggacgggcacctg
aaactgcgcacgtacctggtggatgaggctgtgacgctggcagacgtgactgtggcctgt
gccctgctgctgccttacaaatatgtgctggacccccccagccgggctccttaccccaac
gtcctgcgctggttcctgacttgcgtcaaccagccccagtttcaggccgtgctggggccg
gtgaagctgtgtgagcaggcgcgtgggggtgacacccccagaccgaagacccaggcagag
catgtggggcctgcagagaagggaccagcagtggggtcagcccctggccctggggaggcc
ccggtcaagagcgcctctcagctgaagaaagaggcgaagaagaaagagaagctggagaaa
ttccagcagaagaaggagaaaagccaacagcagcagggggagaaaaaggtaaaagctgag
aagaaggagaagaaagaccccggggttctgacctacgacgcccccacacacccgggggag
aaaaaagacgtgaccggccccatgcccgacgcctacagcccgcagtatgtggaggcggcc
tggtacccgtggtgggaaagccagggcttcttcaaacccgagtacgggcggcagtgcgtc
tcggagcggaaccccaaagggctcttcatgatgtgcatcccgccccccaacgtcaccggc
tcgctgcacctgggccacgcgctcaccaacgccatccaggacgccctgacccgctggcac
cggatgcgcggcgagacgacgctgtggaacccgggctgtgaccacgccggcatcgccacg
caggtggtggtggagaagaagctgtggcgggagcgggggcagacgcggcacgacctgggc
ncggaggcgttcgtccgcgaggtctggaaatggaagaacgagaagggcgacaggatctac
catcagctcaagaagctcggatcgtccatggactgggatagagcctgcttcacgatggac
ccgaaattgtcctgtgctgtccaggaagccttcgtccggctgcacgaggagggggtgatc
taccgcagcaaacgcctggtcaactggtcctgcaccctgcactctgccatctccgacatc
gaggtggataagaaggagctgcccggtcggaccctcctgcccgtccctgggtacaaggac
aaggtggaatttggggtgctggtgtcattcgcctacaagctcgaggactcagacgaggag
gttgtcgtggcgacgacccgggtggagaccatgctgggggacacggcggtggccgtgcat
cggcaggacccccgttaccagcatctccacgggaagcgcgtcctgcaccctntcaccggg
cggcgcatgcccatcgtctgcgacgactttgtggacatgggcttcgggacaggcgcggtg
aagatcaccccggcccacgaccacaacgactacgaggtgggccagcgacatggcctggac
tgcatcaccatcatcgacgacagcggctccctcatcaatgtgcccccccccttcctgggt
atgaagcggttcgaggcccggggggctgtgctggaggccctgaagcagaaggggctgttc
aaggaagtcaaggacaaccccatggtggtgccggtgtgcagccgctcgaaggacgtggtg
gagccgctgctgaagccgcagtggtacgtgcgctgcgaggggctggcccggggggcggcc
gacgccgtgcgccgcggggacctgcgcatcctgccccccttccactgcaagacctggttc
cagtggatggacaacatcagggactggtgcatctcccggcagctgtggtggggccaccgc
atcccggcctacttcgtcactgtcgacgacccctcggtgccccccggagaggacacggac
ggcagatactgggtgagcgggcggagcgaagaggaggccaaggacaaagcggccaaggcc
tttggggtgaccccggacaagatctcactgcggcaagatgacgacgtcctggacacttgg
ttctcctccggcctcttcccgttctccatcttcggctggcccaactctagcgaagacctg
caggttttctacccggggaccctgctggagacgggccatgacatcctcttcttctgggtg
gcgcgcatggtcatgctggggctcaagctgacgggcaagctgcccttccgcgaggtttac
cttcacgctgtcgtccgcgacgcccacggaaggaaaatgagcaagtcattaggcaatgtc
atcgacccactggatgtgatcagcgggatcacgctggagggtttgcacgcgcagctcctg
gagagcaacctggagccagccgaggtggagcgagccaggcagggccagaaaagtgattac
cccgctgggatcccggagtgcggcacggatgccctgcgcttcgccctctgcgcgtacacc
tcccagggccgcgacatcaacctggacgtgaaccgcatcctgggctaccggcacttctgt
aacaagctctggaacgccaccaaattcgccgtccgcgccctggggcccgggttccagccc
ccgccgggacctgagcccggccgcgccgagagcctgatcgaccgctggatcctgagccgg
ctcagcctggccgtggagctgagcgacgccgggttccgggcctacgacttcccggccgtc
accacggccgtctacaacttctggctctatgagctctgcgacgtctacctggagtgcctg
aagcccgtgttcgccgaggggggggcgtctgcggtgacggccgcccgcagcaccctctac
acctgcctggacgccggcctgcggctcctcgcccccttcatgcccttcgtcagcgaggag
cttttccagcgcctgccccgccgcagcccccacgccccccccagcatctgcgtcaccccc
taccccagcaccgagcagttctgctggcgggactgggggctggagggcacggtggagttc
tcgctgggcatcgtccgcgccgtgcgctccctgcgggccgactacaacctcacccggacc
agagccgactgtttcctgcagtgcccagactcgggcgcggccgatgccgccagccgctgc
tccccctacatccgcagcctctcctcctccggccgggtgcgggtgctgggcccgggcgag
gcgccccctgctggctgcgccgtggccgtcgcctccgacaagtgcaccgtccacctgctg
ctcaagggtctgatcgacgcagagaaggagatctccaagctggccgggaagcagggcgag
ctgcagaagcagatcgagcggctgcgggagaggatggaaacccccgattacggcaccaag
gtgccccccaaggttcaggaggccgacgctgccaagctgcagcagagccggaccgagctg
cagaaggtgatggaggcggtggagactttccagaggatgatctga
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