Caretta caretta (Loggerhead turtle): 125621117
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Entry
125621117 CDS
T09292
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125621117 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125621117 (NUP85)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125621117 (NUP85)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125621117 (NUP85)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125621117 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
125621117
NCBI-ProteinID:
XP_048673571
LinkDB
All DBs
Position
13:complement(23315177..23332515)
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AA seq
650 aa
AA seq
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MEELDVEPPLTLIPGVDSNRKQMCFAWGPGEMLVYETLFPKEHAEKRPGCPNIFIVRKDQ
DVYSQTLRKLFNESHGIFVGLQRSEEELAGKSRKAQLVRVSKNYRSVIRACMEEMHQLAI
STRDPELQCQHSTQVSILSAMELIWNLCEILFVEVVPAGHLLLHLLDWVRLHICDVDSMV
REVLSSENPSKHKDFWNAVDIFVLQGRMDDARHLLSKEASANPTSMGMCKILDDLMKKMP
ILTIGNTQTLTEMELKWQHWHEECQRYLQDGTFASNPHMESICKILLGDENTILEKKELM
TTWYHFLVTRLVYSHPTVKPVELRFYAQSSLNLFLGGESSPEPLDSILMAAFEFEIHQVI
KECSIALSNWWFVAHLADLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFSHHSLWQLGV
DYFDHCPEYGKVYLELHIERIPLNTEQKALKVLRICEQRQMHEQVRSICKIMAMKAVRNN
RLGSALSWSIRAKDAAFATLISDRFLKDYCERGSFSDLDLIDNLGPSMLLSDRLTFLGKY
REFHRLYGEKRFSEAAKLLLMLMTARIAPCSFWMTLLIDALPLLEQKEVIFSAEQTYELM
RCLEDLTAGKTDNQKLQVDDFETTKVEILRLALARNLARAIVKEGTLEGS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggacgtggagccgccgcttactctgattcctggggtggactccaacagg
aagcaaatgtgttttgcctggggacctggagagatgctggtgtatgaaactttgttccca
aaagaacatgcagagaaaaggccaggctgccccaacattttcattgttcgcaaagatcaa
gatgtgtactcgcagaccttacgcaaactcttcaatgaatcccatgggatctttgttgga
ctccagaggagtgaggaagagttggctgggaagtcaaggaaagcacaattggttcgagtg
agtaaaaactaccgttcagtcataagagcctgtatggaggagatgcaccagttggctatt
tctacccgggaccctgagctgcaatgccagcacagcacccaggtctctattctgtccgcg
atggagctgatctggaacttgtgtgagatcctttttgttgaagtagtgccagctggtcat
ctcctgcttcaccttctcgactgggttcgtcttcatatttgtgacgtagacagcatggtc
cgtgaagttctgagcagtgaaaatccatcaaaacataaagacttctggaatgctgtggac
atcttcgtgctgcagggccggatggatgatgcacggcacttactctctaaggaagccagt
gccaaccccacgtcgatgggcatgtgcaaaattctggatgacctgatgaagaagatgccc
attcttactattggcaacacacagacgttgactgagatggaactgaaatggcagcattgg
catgaagaatgtcagcggtacctccaggatgggacctttgcttctaatccccacatggag
tccatctgcaagatcctgctgggagatgagaacaccatactggagaagaaggagctcatg
actacttggtaccactttctggtcacccgacttgtctactcccatccaactgtgaagcca
gtggaacttcgcttctacgcacagtctagcctgaacctgttcctgggaggagagagcagc
cctgaacctctagacagcatcttaatggcagcctttgagttcgagatccatcaagtgatt
aaagaatgcagcatcgccctgagcaactggtggtttgtggctcatctggctgacctgctg
gatcactgcaaactcctgcagtctcacaatctctattttggttccaatatgcgtgaattc
ctcctgttggagtatgcctccgggctcttttcccatcacagcctgtggcagttgggggta
gattattttgatcattgtccagagtatggcaaggtttacctggagcttcatattgagcga
atccccctcaacacagagcaaaaagccctcaaggtgctgaggatctgtgagcagagacag
atgcacgaacaagttcgcagcatctgtaaaatcatggccatgaaagctgtgcggaacaat
cgcttaggctcagcactatcctggagcatccgagccaaggacgcagcgtttgctacgctc
atatcggacaggttcctgaaggattattgtgagaggggcagcttctcagacctggacctt
atcgacaacctggggccctccatgctgctcagtgatcggctgacatttcttgggaagtac
cgagaattccatcggctgtatggtgagaaacggttctctgaagctgccaagctgctcctg
atgctgatgacggctcgtattgctccgtgttccttctggatgaccttgttaattgacgct
cttcccctcctggagcaaaaagaggtaatattttcagcagagcagacctatgaattgatg
cgctgcttggaggacctgacagctggaaagacagacaaccagaaactccaggttgatgac
tttgagaccaccaaggtggaaatcctgagacttgctcttgcacgaaaccttgcccgagct
attgtcaaggagggcacgttggaaggatcatga
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