Caretta caretta (Loggerhead turtle): 125621203
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Entry
125621203 CDS
T09292
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125621203
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Gene cluster
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Motif
Pfam:
V-set
Ig_3
C1-set
ig
I-set
C2-set_2
BT_MCC_alpha
Motif
Other DBs
NCBI-GeneID:
125621203
NCBI-ProteinID:
XP_048673764
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All DBs
Position
13:175870..181196
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AA seq
447 aa
AA seq
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MTSFVPVGALALLLPGFALCLALAGPPRLSCWFVEEAGGRMGMMPSSVTQRRALLLLRGA
RGGLPETEPELPPDLEPGMVFDITDPAGALHRVPLPVGGRSKEGELPSCEINAYTPQEAH
VPWAAGLTPEHRSPLGLGGPWFISSVQAPARGYGVSAVLKSEEAATSQQPAVIMATAVLS
VFSRTPHLHSRLGRDVLLDCGFTAPPGPFSVEWRYQYRGAGRVVLAYDGVSGRAHVAEEG
AQLFLEEGRAGADTNVSLRLSQVGVRHEGTYICTIYLPHLHAQQALELRITEPPMVMLHP
DPLSVAPGAPAELACEVSGYYPLDVTVSWLRRGPGEAGGDLLEYVTETWESGHRHGPDGT
YSLSSFARLAPVQPRDHGATYSCHVTHAALATPARRSVRLRVAGATGPSLEDAIGMFLAA
FLLYGLFHLLGNKVCPSGAEEKSKKSE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgttcgtccccgtgggggccctggccctgctcctgcctgggttcgctctgtgt
ctggctctggcggggcccccccggctgagctgctggttcgtggaggaggctggggggcgc
atggggatgatgccgagttccgtgactcagcgccgggcgctgctactgctgcggggggcg
agaggggggctccccgagacagagcccgagctgcctcccgacctggagccaggcatggtt
tttgacatcactgaccctgcaggggctctgcaccgcgtccccctcccagtgggggggcgc
tccaaggagggggagctgccttcctgtgagatcaacgcctacacaccacaggaggcccac
gtgccctgggcagccggcctgacccccgagcaccgcagccccctgggcctggggggtccc
tggttcatcagcagcgtccaggccccggccaggggctacggggtcagcgctgtcctcaag
agtgaggaggcggcaacgtcccagcaaccagcagtcatcatggcaactgcggtgttgtcc
gtgttctcccgcaccccgcacctgcactcccgcctgggccgggacgtgctgctggactgt
ggcttcacggcaccacctggccccttctcggtggagtggcggtaccaataccggggtgct
gggcgcgtggtgctggcctacgatggggtgtcaggccgggcccacgtggccgaggagggg
gcgcagctgttcctggaggaggggagggcgggcgcagacaccaacgtgtcgctgcgactg
tcccaagtcggggtgcggcacgaaggaacctacatctgcaccatctacctgccccacctc
catgctcagcaggccctggagctgcgcatcaccgagccccccatggtgatgctgcaccct
gaccccctatcggtggcccctggggcaccagctgagctggcctgtgaggtctctggctat
tacccattggatgtgacggtgagctggctgcgccggggccccggggaggcggggggcgac
ctgctggagtacgtgactgagacctgggagtcagggcaccggcatggccccgacggcacc
tacagcctgagcagcttcgcccgcctggcacccgtccagccccgcgaccacggagccacc
tacagctgccacgtgacccacgccgccctggccacccctgcccggaggagcgtccggctc
cgggtggcaggtgccacaggcccctccctggaggatgccattgggatgttcctggctgcg
ttcctgctctatgggctcttccacctcctcggaaacaaggtctgtccatccggagctgaa
gagaaaagcaagaaatcagagtga
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