Caretta caretta (Loggerhead turtle): 125621216
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Entry
125621216 CDS
T09292
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125621216 (VPS52)
Membrane trafficking [BR:
ccay04131
]
Protein recycling
Others
EARP complex
125621216 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
125621216 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
CoV_NSP7
SICA_beta
Motif
Other DBs
NCBI-GeneID:
125621216
NCBI-ProteinID:
XP_048673810
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All DBs
Position
13:217772..229018
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AA seq
726 aa
AA seq
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MAALRPDEELGLRATEMEEEEGMGRGEEQSLQLNLGDLDLTSDEFILDEVDIHIQANLED
SLVQEALKTGMDLRQYSKQVELELQHIEHASIRDYIKESKNITSLHNQITACDAILERME
QMLSSFQCDLSSISCEIQTLQEQSVAMNLRLKNRQAVRSQLSQLVDELVVPAAMISTILE
APVTEQDFLEQLHELNNKMNYVKEQAFRETMACTDVHHVLDRLKVKAVTKIREFVLQKVY
SFRKPMTNYQIPQNALLKYRFFYQFLLGNERSVAQELREQYVETMSKIYLSYFKSYTSRL
MKIQYEEVAEKDDLMGVEDTAKKGFFSKPSLKNRNTIFTLGNRGSVIGGAELEGPIIVPH
AAQKSDVRYPFESLFRSQHYALLDNSCREYLFLCDFFLVTGPSAQELFNAVMGKTLAMFL
KHMDAYVCDCYDSIAIFLCIHIVLRFRAITAKRNVPAIDKYWDTLLEILWPRFEYILELN
IQSIQNTDPQKLGFLDTRPHYITRRYAEFSSAIVSINQTFPNERTHALLGQLQVEVENFV
LRVAAEFSSRKEQLIFLINNYDMMLSVLMVTPPAPFPPQERAVEESKEVEGFQQLLSARS
QEFIEEILSPPFGGMIAFVKESESLIEKGQLDRLRGEEARVTQLVRGFSTTWKASVELLS
QDVMRSFSNFKNGTSIIQGALTQLIQYYHRFHKVLTQPPLRALPARAELINIHHLMVELK
KHKPNF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgaggcccgatgaggagctggggctgcgggcgactgagatggaagaagag
gaggggatgggccgtggagaggagcagtcgctgcagctgaacctgggggacctggacctc
acctctgatgagttcatcctggatgaagtggacattcacatccaagccaacctggaggac
tccctggttcaggaggcgctgaagacgggcatggatctgcggcagtactccaagcaggtg
gaactggagctgcagcacattgagcacgcctccatcagggactacatcaaggagagcaag
aacatcacctccctgcacaaccagatcaccgcctgtgacgccatcctggagcgcatggag
cagatgctgagctccttccagtgcgacctgagcagcatcagctgcgagatccagacgctg
caggagcagtcggtggccatgaacctgcggctcaagaaccgccaggccgtgcgcagccag
ctcagccagctggtggacgagctcgtggtgccagctgctatgatcagcaccatcctggag
gccccggtgaccgagcaggacttcctggagcagctgcatgagctgaacaacaagatgaac
tacgtgaaggagcaggccttccgcgagaccatggcctgcactgacgtgcaccacgtgctg
gaccggctgaaggtcaaggctgtgaccaagatccgggagttcgtcctacaaaaagtctac
tccttccgtaaacccatgaccaactaccagatcccccagaatgccctgctcaagtacagg
ttcttctaccagttcctgctagggaatgagcggtcggtggcgcaggagctgcgggagcag
tacgtggagaccatgagcaagatctacctgtcctacttcaaatcctacaccagccgcctc
atgaagatccagtacgaggaggtggcggagaaggatgacctgatgggagtggaggatacg
gccaagaaagggtttttctcaaagccatcgctgaagaaccgcaacacaatctttacgctg
gggaaccggggcagtgtgatcgggggggccgagctggaggggcccatcattgtgcctcat
gccgcccagaagagcgatgtccgctaccccttcgagtcgctgttccgcagccagcactat
gctctgctggacaacagctgccgcgagtatctcttcctctgcgacttcttcctggtgacg
gggcccagcgcccaggagctcttcaacgccgtcatgggcaagacgctggccatgttcctg
aaacacatggacgcgtacgtgtgtgactgctatgacagcattgccatcttcctctgcatc
cacatcgtcctgcgcttccgagccatcacggccaagcgcaacgtccccgccatcgacaag
tactgggacacgctgctggagatcctgtggccgcggttcgagtacatcctggagctgaac
atccagagcatccagaacacagacccccagaaactgggcttcctggacacgcgcccccac
tacatcacacggcgctatgcggagttctcctctgccatcgtcagcatcaaccagaccttc
cccaacgagcgaacccacgcgttgctggggcagctgcaggtggaggtggagaacttcgtg
ctgcgggtggcggctgagttctcatcgcgcaaggagcagctcatcttcctcatcaacaac
tacgacatgatgctgagcgtcctcatggtcacaccccctgccccattccctccccaggag
cgggcagtggaggaaagcaaggaggtggagggcttccagcagctgctttcagcccggtcc
caggagttcatcgaggagattctgtcgcccccgtttggggggatgatcgccttcgtcaag
gagtcggagtcactcattgagaaggggcagctcgaccggctgcgtggggaggaggcccgg
gtgacccagctggtgcgcggattctctaccacgtggaaggcctcggtggaattgctgagc
caggacgtcatgagatccttcagcaacttcaaaaacgggaccagcatcatccagggggcg
ctgacccagctgatccagtactatcaccgcttccacaaggtgctaactcagccccccctg
cgcgccctgccggcccgcgccgagctcatcaacatccaccacctcatggtggagctgaag
aaacacaagcccaacttctag
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